Detailed information NTG0034038

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: VCD_RS17540
• Genome accession: NC_012667
• Coordinates: 662790..665363 (+)
• Length: 857 a.a.
• NCBI ID: WP_001026306.1
• Uniprot ID: Q9KLK7
• Organism: Vibrio cholerae MJ-1236
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 657790..670363

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VCD_RS17500 (VCD_000576)	-	657821..658072 (-)	252	WP_001882582.1	YgjV family protein	-
VCD_RS17505 (VCD_000577)	-	658336..658485 (-)	150	WP_000611732.1	hypothetical protein	-
VCD_RS17510 (VCD_000578)	-	658485..658805 (-)	321	WP_001089529.1	DUF496 family protein	-
VCD_RS17515 (VCD_000579)	-	658993..659190 (+)	198	WP_001246071.1	hypothetical protein	-
VCD_RS17520 (VCD_000580)	-	659232..659882 (+)	651	WP_001025631.1	YceH family protein	-
VCD_RS17525 (VCD_000581)	-	659899..660204 (+)	306	WP_000429067.1	GIY-YIG nuclease family protein	-
VCD_RS17530 (VCD_000582)	traF	660306..661466 (+)	1161	WP_001025860.1	conjugal transfer protein TraF	-
VCD_RS17535 (VCD_000583)	luxP	661678..662772 (+)	1095	WP_000823678.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
VCD_RS17540 (VCD_000584)	luxQ	662790..665363 (+)	2574	WP_001026306.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
VCD_RS17545 (VCD_000585)	-	665355..666020 (-)	666	WP_000268204.1	PilZ domain-containing protein	-
VCD_RS17550 (VCD_000586)	-	666264..666782 (-)	519	WP_000914961.1	hypothetical protein	-
VCD_RS17560 (VCD_000587)	-	667034..667432 (-)	399	WP_000831416.1	YgiW/YdeI family stress tolerance OB fold protein	-
VCD_RS17565 (VCD_000588)	-	667635..667940 (+)	306	WP_001181134.1	hypothetical protein	-

Sequence

Protein

• Length: 857 a.a.
• Molecular weight: 96929.73 Da
• Isoelectric Point: 6.0197

>NTDB_id=34038 VCD_RS17540 WP_001026306.1 662790..665363(+) (luxQ) [Vibrio cholerae MJ-1236]
MNIRPSQIKHKQRIASFITHAVVVVMGVLIVSVLFQSYQISSRLMAQEGQRTSVQTSSLIQSLFDFRLAALRIHQDSTAK
NASLINALVSRDSSRLDEFFSSVDELELSNAPDLRFISSHDNILWDDGNASFYGIAQQELNKLIRRVAISGNWHLVQTPS
EGKSVHILMRRSSLIEAGTGQVVGYLYVGIVLNDNFALLENIRSGSNSENLVLAVDTTPLVSTLKGNEPYSLDYVVHSAK
DAMRDSFIVGQTFLEVESVPTYLCVYSIQTNQNVLTLRDNFYFWMAFALISMIGVSIASRWWLQKRIQREIETLMNYTHK
LMDLDTKSEFIGSKIYEFDYFGRTLEQSFRRLANKEKQFEDLFNFALSPTMLWNTSGRLIRMNPSAQIQFLREDAQNHFL
FEILERQLLPTITNAAQGNNPSDVTTEVDGRVYRWNLSPIMVEGQIISIITQGQDITTIAEAEKQSQAARREAEESARVR
AEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVC
AIDRIYRPLCNEKGLELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQLIEGDPLAQLVIQVVDTGI
GIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLPIELVEKPDAPQQLLPAP
DPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVETTRTIKKVLH
LPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKALEHFKHHHGQKNAGLN

Nucleotide

• Length: 2574 bp

>NTDB_id=34038 VCD_RS17540 WP_001026306.1 662790..665363(+) (luxQ) [Vibrio cholerae MJ-1236]
TTGAACATTCGACCTAGCCAAATCAAGCATAAACAGCGCATCGCTTCTTTTATCACCCATGCTGTCGTGGTGGTGATGGG
CGTTCTGATCGTCAGTGTATTATTCCAAAGTTACCAGATCAGTAGCCGCTTGATGGCTCAAGAAGGACAACGCACTTCAG
TTCAAACCTCCAGCTTGATTCAAAGTTTGTTTGATTTTCGTCTTGCGGCACTGCGAATTCACCAGGACAGCACAGCCAAG
AACGCCAGTTTAATCAACGCACTTGTCAGCCGAGATTCGAGTCGGCTGGATGAATTCTTTTCCAGTGTTGATGAACTTGA
ACTCTCTAATGCGCCAGATCTGCGTTTTATCTCCAGTCACGACAACATCTTGTGGGATGATGGCAACGCCTCTTTTTACG
GCATTGCCCAGCAAGAGCTGAATAAGCTTATCCGCAGAGTGGCGATTAGTGGCAATTGGCACTTGGTTCAAACGCCCAGC
GAGGGAAAATCAGTCCATATTTTGATGCGTCGTTCATCGCTGATTGAAGCGGGAACCGGGCAGGTTGTTGGGTATCTGTA
TGTAGGCATCGTACTCAATGATAACTTTGCGCTGTTGGAAAATATCCGCAGTGGCAGTAACTCAGAAAACCTAGTCCTTG
CCGTGGATACTACGCCGCTGGTTTCTACCTTGAAAGGCAATGAACCTTATTCGCTGGACTATGTGGTGCACAGCGCCAAA
GATGCTATGCGAGACAGCTTTATTGTTGGGCAAACCTTCTTAGAAGTGGAAAGTGTACCGACCTATCTGTGCGTCTACTC
GATTCAGACCAACCAAAATGTGCTCACCCTGCGGGATAATTTCTATTTTTGGATGGCGTTTGCGCTGATCAGTATGATCG
GTGTTTCCATAGCGTCACGCTGGTGGCTACAAAAACGCATTCAGCGTGAAATTGAAACCTTGATGAATTACACCCATAAA
TTGATGGATCTGGATACGAAAAGTGAGTTTATCGGTTCAAAAATTTATGAGTTCGACTATTTTGGGCGAACGTTGGAACA
ATCATTCCGTCGTCTCGCCAATAAAGAAAAGCAGTTTGAAGATCTGTTTAACTTTGCGCTTTCACCGACCATGCTTTGGA
ATACCTCTGGTCGGCTGATCCGCATGAACCCCTCAGCGCAAATCCAGTTTTTGCGCGAAGATGCGCAAAACCATTTCTTA
TTTGAGATTCTTGAACGCCAACTGTTGCCGACCATCACTAATGCGGCACAGGGCAATAATCCGAGTGACGTCACAACCGA
AGTGGATGGTCGTGTGTACCGCTGGAACCTTTCACCGATCATGGTGGAAGGGCAGATCATTTCCATCATTACTCAAGGGC
AAGATATCACCACCATCGCGGAAGCGGAGAAGCAAAGCCAAGCCGCAAGGCGCGAAGCGGAAGAGTCGGCACGGGTCAGG
GCCGAGTTTTTGGCCAAAATGAGTCACGAATTGCGCACGCCGCTCAATGGTGTGCTCGGTGTTTCCCAACTGCTAAAACG
GACCCCACTCAATGATGAACAGCGCGAACACGTGGCTGTGTTATGCAGCAGTGGTGAACATTTGCTCGCGGTGCTGAATG
ACATCTTGGATTTCTCACGCTTAGAGCAGGGCAAATTCCGTATTCAAAAGAATGAGTTTCGCCTTAAAGAGTTGGTGTGC
GCGATTGACCGCATTTATCGACCTTTATGTAATGAAAAAGGCTTGGAACTGGTGGTGAATTCCAATATCACTACCGCAGC
GATTGTGCGCAGCGATCAGATCCGGATTAACCAAATCTTGTTCAATTTGCTCAATAACGCGATCAAGTTTACTCACCAAG
GTTCGATACGTGTCGAATTGCAATTAATTGAAGGTGATCCATTAGCTCAGCTGGTGATTCAAGTCGTCGATACGGGGATT
GGTATCCGCGAACAAGATTTAACGGTGATTTTTGAACCCTTCATGCAAGCTGAATCGACCACCACTCGAGAGTACGGCGG
AAGTGGTTTAGGCTTAACGATTGTGCACAGTTTAGTGGAAATGCTCAGTGGTCAACTGCACGTCAGCTCCGAGTATGGCA
TTGGTACACGTTTTGAAATTCAGTTACCGATTGAGCTGGTAGAAAAACCGGATGCGCCGCAGCAGTTGTTACCAGCTCCT
GATCCTCAACCGTTATTTGATAAAACTCTGCGTGTACTGTTGGTGGAGGATAACCACACCAATGCCTTTATTGCTCAAGC
ATTCTGTCGTAAATATGGCTTAGATGTGAGCTGGGTAACGGATGGACTACAGGCGATTGAAGAGCTCAAAATACATGACT
ACGACTTAGTGCTGATGGATAACCAGTTACCCTATTTGGATGGCGTTGAGACCACGCGCACCATCAAAAAAGTGCTGCAC
CTTCCGGTGGTGGTGTATGCCTGCACTGCGGATGGCTTAGAAGAAACACGGCAAGCATTTTTCCATGCGGGCGCGGAATA
TGTGTTAGTGAAGCCACTGAAAGAGCAGACTTTGCATAAAGCGCTGGAGCATTTCAAACATCATCATGGCCAAAAAAACG
CTGGCTTAAATTGA

Domains

Predicted by InterproScan.

• LuxQ, periplasmic (LuxQ-periplasm) (41-277)

• Response regulator receiver domain (Response_reg) (732-842)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (592-705)

• His Kinase A (phospho-acceptor) domain (HisKA) (480-544)

3D structure

• PDB: 3C30
• PDB: 3C38

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	100	100	1