Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   ETA15_RS02155 Genome accession   NZ_CP035403
Coordinates   410608..411006 (-) Length   132 a.a.
NCBI ID   WP_017696126.1    Uniprot ID   A0AAP2LZ45
Organism   Bacillus subtilis strain SRCM103581     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 405608..416006
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA15_RS02125 (ETA15_02125) yckA 406308..406988 (-) 681 WP_017696121.1 amino acid ABC transporter permease -
  ETA15_RS02130 (ETA15_02130) yckB 406998..407861 (-) 864 WP_072557073.1 transporter substrate-binding domain-containing protein -
  ETA15_RS02135 (ETA15_02135) - 408024..408214 (+) 191 Protein_374 hypothetical protein -
  ETA15_RS02140 (ETA15_02140) - 408259..408570 (+) 312 Protein_375 RDD family protein -
  ETA15_RS02145 (ETA15_02145) yckD 408652..408984 (+) 333 WP_015252849.1 YckD family protein -
  ETA15_RS02150 (ETA15_02150) bglC 409138..410571 (+) 1434 WP_017696125.1 6-phospho-beta-glucosidase -
  ETA15_RS02155 (ETA15_02155) nin/comJ 410608..411006 (-) 399 WP_017696126.1 DNA-entry nuclease inhibitor Regulator
  ETA15_RS02160 (ETA15_02160) nucA/comI 411033..411482 (-) 450 WP_017696127.1 DNA-entry nuclease Machinery gene
  ETA15_RS02165 (ETA15_02165) tlpC 411650..413371 (-) 1722 WP_026113668.1 methyl-accepting chemotaxis protein TlpC -
  ETA15_RS02170 (ETA15_02170) hxlB 413482..414039 (-) 558 WP_017696129.1 6-phospho-3-hexuloisomerase -
  ETA15_RS02175 (ETA15_02175) hxlA 414045..414677 (-) 633 WP_017696130.1 3-hexulose-6-phosphate synthase -
  ETA15_RS02180 (ETA15_02180) hxlR 414909..415271 (+) 363 WP_017696131.1 transcriptional activator HxlR -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 14949.93 Da        Isoelectric Point: 4.8991

>NTDB_id=340304 ETA15_RS02155 WP_017696126.1 410608..411006(-) (nin/comJ) [Bacillus subtilis strain SRCM103581]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVSSYEKKVTVPF
HITENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=340304 ETA15_RS02155 WP_017696126.1 410608..411006(-) (nin/comJ) [Bacillus subtilis strain SRCM103581]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCACCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAGCTCGTATGAAAAAAAAGTGACTGTTCCTTTT
CATATCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTATCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

97.727

100

0.977


Multiple sequence alignment