Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   ES969_RS06345 Genome accession   NZ_CP035402
Coordinates   1211272..1212423 (+) Length   383 a.a.
NCBI ID   WP_014479449.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103576     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1206272..1217423
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES969_RS06310 (ES969_06310) yjbB 1206943..1208160 (+) 1218 WP_080478438.1 MFS transporter -
  ES969_RS06315 (ES969_06315) yjbC 1208325..1208903 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  ES969_RS06320 (ES969_06320) spx 1209084..1209479 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  ES969_RS06325 (ES969_06325) yjbE 1209522..1210178 (-) 657 WP_003232944.1 TerC family protein -
  ES969_RS06330 (ES969_06330) - 1210348..1210488 (+) 141 WP_119122854.1 hypothetical protein -
  ES969_RS06335 (ES969_06335) mecA 1210455..1211111 (+) 657 WP_014479448.1 adaptor protein MecA Regulator
  ES969_RS06340 (ES969_06340) - 1211106..1211228 (-) 123 WP_003245684.1 hypothetical protein -
  ES969_RS06345 (ES969_06345) coiA 1211272..1212423 (+) 1152 WP_014479449.1 competence protein CoiA Machinery gene
  ES969_RS06350 (ES969_06350) pepF 1212653..1214482 (+) 1830 WP_173401378.1 oligoendopeptidase F -
  ES969_RS06355 (ES969_06355) - 1214520..1214687 (-) 168 WP_003244944.1 hypothetical protein -
  ES969_RS06365 (ES969_06365) spxH 1215002..1215901 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  ES969_RS06370 (ES969_06370) bhbI 1215898..1216296 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  ES969_RS06375 (ES969_06375) cwlQ 1216551..1217285 (-) 735 WP_014479451.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44861.98 Da        Isoelectric Point: 9.9417

>NTDB_id=340243 ES969_RS06345 WP_014479449.1 1211272..1212423(+) (coiA) [Bacillus subtilis strain SRCM103576]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGADDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKEINRLRLLFYEKRQTSFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=340243 ES969_RS06345 WP_014479449.1 1211272..1212423(+) (coiA) [Bacillus subtilis strain SRCM103576]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATTCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGACTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGACGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAATAAATCGCCTTAGGCTGCTGTTTTATGAGAAGCGGCAGACATCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTGTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTTGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.391

97.389

0.958


Multiple sequence alignment