Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | F3K22_RS23220 | Genome accession | NZ_CP043958 |
| Coordinates | 5344081..5344680 (+) | Length | 199 a.a. |
| NCBI ID | WP_013001867.1 | Uniprot ID | C9Z3Z6 |
| Organism | Streptomyces sp. LBUM 1475 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 5339081..5349680
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F3K22_RS23200 (F3K22_23520) | - | 5339505..5339990 (+) | 486 | WP_013001871.1 | helix-turn-helix domain-containing protein | - |
| F3K22_RS23205 (F3K22_23525) | - | 5340107..5342293 (+) | 2187 | WP_210525004.1 | serine/threonine-protein kinase | - |
| F3K22_RS23210 (F3K22_23530) | - | 5342580..5343347 (-) | 768 | WP_013001869.1 | SLATT domain-containing protein | - |
| F3K22_RS23215 (F3K22_23535) | - | 5343623..5343970 (+) | 348 | WP_013001868.1 | YbaB/EbfC family nucleoid-associated protein | - |
| F3K22_RS23220 (F3K22_23540) | recR | 5344081..5344680 (+) | 600 | WP_013001867.1 | recombination mediator RecR | Machinery gene |
| F3K22_RS23225 (F3K22_23545) | - | 5344673..5345338 (+) | 666 | WP_013001866.1 | DUF5063 domain-containing protein | - |
| F3K22_RS23230 (F3K22_23550) | - | 5345524..5348025 (+) | 2502 | WP_158953035.1 | tetratricopeptide repeat protein | - |
| F3K22_RS23235 | - | 5348097..5348660 (+) | 564 | WP_013001864.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 21746.11 Da Isoelectric Point: 5.1616
>NTDB_id=339972 F3K22_RS23220 WP_013001867.1 5344081..5344680(+) (recR) [Streptomyces sp. LBUM 1475]
MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKAKVRFCATCGNVAQEELCGICRDSRRDVTV
ICVVEEPKDVVAIERTREFRGTYHVLGGAISPIEGVGPDDLRIRELLARLADGRVTELILATDPNLEGEATATYLARMIK
PMGLKVTRLASGLPVGGDLEYADEVTLGRAFEGRRLLDV
MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKAKVRFCATCGNVAQEELCGICRDSRRDVTV
ICVVEEPKDVVAIERTREFRGTYHVLGGAISPIEGVGPDDLRIRELLARLADGRVTELILATDPNLEGEATATYLARMIK
PMGLKVTRLASGLPVGGDLEYADEVTLGRAFEGRRLLDV
Nucleotide
Download Length: 600 bp
>NTDB_id=339972 F3K22_RS23220 WP_013001867.1 5344081..5344680(+) (recR) [Streptomyces sp. LBUM 1475]
GTGTACGAAGGCGTGGTCCAGGACCTCATCGACGAGCTGGGGCGGCTGCCCGGCGTCGGTCCCAAGAGCGCGCAGCGGAT
CGCCTTCCACATCCTGCAGGCGGAGCCGACGGACGTCCGGCGGCTGGCGCACGCGCTCCTCGAAGTGAAGGCGAAGGTCC
GCTTCTGCGCCACCTGCGGCAACGTCGCGCAGGAGGAGCTGTGCGGGATCTGCCGCGACTCCCGCCGTGACGTCACGGTC
ATCTGTGTCGTGGAGGAGCCGAAGGACGTCGTGGCGATCGAACGCACCCGCGAGTTCCGGGGCACGTACCACGTCCTCGG
CGGCGCGATCAGCCCGATCGAGGGCGTCGGCCCCGACGACCTGCGCATACGGGAGCTGCTGGCCCGCCTGGCCGACGGCA
GGGTCACCGAGCTGATCCTGGCCACGGACCCGAATCTCGAAGGCGAGGCCACGGCCACGTACCTCGCCCGCATGATCAAA
CCCATGGGCCTCAAGGTCACCCGCCTGGCCAGCGGCCTCCCGGTGGGCGGCGACCTGGAATACGCGGACGAGGTGACCCT
CGGCCGCGCCTTCGAGGGGAGACGATTGCTGGATGTCTGA
GTGTACGAAGGCGTGGTCCAGGACCTCATCGACGAGCTGGGGCGGCTGCCCGGCGTCGGTCCCAAGAGCGCGCAGCGGAT
CGCCTTCCACATCCTGCAGGCGGAGCCGACGGACGTCCGGCGGCTGGCGCACGCGCTCCTCGAAGTGAAGGCGAAGGTCC
GCTTCTGCGCCACCTGCGGCAACGTCGCGCAGGAGGAGCTGTGCGGGATCTGCCGCGACTCCCGCCGTGACGTCACGGTC
ATCTGTGTCGTGGAGGAGCCGAAGGACGTCGTGGCGATCGAACGCACCCGCGAGTTCCGGGGCACGTACCACGTCCTCGG
CGGCGCGATCAGCCCGATCGAGGGCGTCGGCCCCGACGACCTGCGCATACGGGAGCTGCTGGCCCGCCTGGCCGACGGCA
GGGTCACCGAGCTGATCCTGGCCACGGACCCGAATCTCGAAGGCGAGGCCACGGCCACGTACCTCGCCCGCATGATCAAA
CCCATGGGCCTCAAGGTCACCCGCCTGGCCAGCGGCCTCCCGGTGGGCGGCGACCTGGAATACGCGGACGAGGTGACCCT
CGGCCGCGCCTTCGAGGGGAGACGATTGCTGGATGTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Bacillus subtilis subsp. subtilis str. 168 |
55.102 |
98.492 |
0.543 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
54.124 |
97.487 |
0.528 |
| recR | Streptococcus pneumoniae R6 |
47.423 |
97.487 |
0.462 |