Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   F3K21_RS24060 Genome accession   NZ_CP043957
Coordinates   5610159..5611283 (-) Length   374 a.a.
NCBI ID   WP_037726228.1    Uniprot ID   -
Organism   Streptomyces sp. LBUM 1480     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5605159..5616283
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F3K21_RS24040 (F3K21_24425) - 5605726..5606277 (-) 552 WP_013001644.1 SigE family RNA polymerase sigma factor -
  F3K21_RS24045 (F3K21_24430) - 5606628..5607491 (-) 864 WP_246890542.1 A/G-specific adenine glycosylase -
  F3K21_RS24050 (F3K21_24435) - 5607898..5608956 (-) 1059 WP_210533508.1 LLM class flavin-dependent oxidoreductase -
  F3K21_RS24055 (F3K21_24440) - 5609244..5610068 (+) 825 WP_013001641.1 hypothetical protein -
  F3K21_RS24060 (F3K21_24445) disA 5610159..5611283 (-) 1125 WP_037726228.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  F3K21_RS24065 (F3K21_24450) radA/sms 5611364..5612773 (-) 1410 WP_013001639.1 DNA repair protein RadA Machinery gene
  F3K21_RS24070 (F3K21_24455) - 5612849..5614249 (-) 1401 WP_060906558.1 hypothetical protein -
  F3K21_RS24075 (F3K21_24460) - 5614465..5616183 (+) 1719 WP_210533509.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40150.94 Da        Isoelectric Point: 5.1026

>NTDB_id=339892 F3K21_RS24060 WP_037726228.1 5610159..5611283(-) (disA) [Streptomyces sp. LBUM 1480]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGFDKTVEPMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGHRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALRELDALAHSELLELPTVARALGYTGSPEGMDSAVSPRGYRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=339892 F3K21_RS24060 WP_037726228.1 5610159..5611283(-) (disA) [Streptomyces sp. LBUM 1480]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGCGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCGCT
GAGCGCCGTGGCACCAGGTACGGCCCTGCGCGACGGGCTGGAGCGGATTCTCCGCGGCAACACCGGCGGGCTCATCGTGC
TCGGCTTCGACAAGACCGTCGAGCCGATGTGCACCGGCGGTTTCGTCCTGGACGTCGAGTTCACGGCCACCCGTCTGCGG
GAGCTGTGCAAGCTCGACGGAGGCATCGTGCTCTCCTCGGACCTCTCCAAGATCCTCCGGGCGGGCGTGCAGCTGGTCCC
CGACCCGACGATCCCCACCGAGGAGACCGGCACCCGGCACCGCACGGCCGACCGGGTGAGCAAGCAGGTCGGCTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGACTGATCGCGCTGTACGTCGACGGCCACCGGCGGGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCGAACCAGGCCCTGGCGACCCTGGAGCGGTACAAGCTCCGGCTGGACGAGGTGGCCGGCACCCTCTC
CGCGCTGGAGATCGAGGACCTGGTCACGGTCCGGGACGTGTCGGCGGTCGCCCAGCGCCTGGAGATGGTCCGCCGCATCG
CCACCGAAATCGCCGAATACGTGGTCGAACTGGGCACGGACGGCCGTCTTCTGGCCCTCCAGCTCGACGAGCTGATCGCG
GGCGTCGAGCCGGAGCGCGAACTGGTCGTGCGGGACTACGTCCCCGAGCCGACGGCCAAGCGCTCCCGCACGGTCGACGA
GGCCCTGCGCGAACTCGACGCCCTCGCCCACTCGGAGCTCCTCGAACTGCCCACCGTCGCCCGCGCCCTCGGCTACACCG
GCTCCCCGGAAGGCATGGACTCCGCGGTCTCCCCGCGCGGCTACCGCCTCCTGGCCAAGGTGCCCCGTCTGCCCGGTGCC
ATCATCGACCGCCTCGTGGAGCACTTCGGCGGTCTCCAGAAGCTCCTGGCCGCCAGCGTCGACGACCTCCAGACGGTCGA
CGGCGTGGGCGAGGCCCGCGCCCGCAGCGTCCGCGAGGGCCTGTCACGCCTGGCGGAGTCCTCGATCCTGGAGCGGTACG
TCTAG

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438

Multiple sequence alignment