Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   ES968_RS06300 Genome accession   NZ_CP035395
Coordinates   1224299..1225450 (+) Length   383 a.a.
NCBI ID   WP_046380934.1    Uniprot ID   A0AA96USA1
Organism   Bacillus subtilis strain SRCM103697     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1219299..1230450
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES968_RS06265 (ES968_06265) yjbB 1219971..1221188 (+) 1218 WP_095010820.1 MFS transporter -
  ES968_RS06270 (ES968_06270) yjbC 1221352..1221930 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  ES968_RS06275 (ES968_06275) spx 1222111..1222506 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  ES968_RS06280 (ES968_06280) yjbE 1222549..1223205 (-) 657 WP_014479447.1 TerC family protein -
  ES968_RS06285 (ES968_06285) - 1223375..1223515 (+) 141 WP_119122854.1 hypothetical protein -
  ES968_RS06290 (ES968_06290) mecA 1223482..1224138 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  ES968_RS06295 (ES968_06295) - 1224133..1224255 (-) 123 WP_003245684.1 hypothetical protein -
  ES968_RS06300 (ES968_06300) coiA 1224299..1225450 (+) 1152 WP_046380934.1 competence protein CoiA Machinery gene
  ES968_RS06305 (ES968_06305) pepF 1225680..1227509 (+) 1830 WP_173401378.1 oligoendopeptidase F -
  ES968_RS06310 (ES968_06310) - 1227547..1227714 (-) 168 WP_003244944.1 hypothetical protein -
  ES968_RS06320 (ES968_06320) spxH 1228029..1228928 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  ES968_RS06325 (ES968_06325) bhbI 1228925..1229323 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  ES968_RS06330 (ES968_06330) cwlQ 1229578..1230312 (-) 735 WP_014479451.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44783.89 Da        Isoelectric Point: 10.0034

>NTDB_id=339847 ES968_RS06300 WP_046380934.1 1224299..1225450(+) (coiA) [Bacillus subtilis strain SRCM103697]
MFSAVTEDGQLFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=339847 ES968_RS06300 WP_046380934.1 1224299..1225450(+) (coiA) [Bacillus subtilis strain SRCM103697]
TTGTTTAGTGCTGTGACTGAAGACGGCCAACTGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGGATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTTGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.928

97.389

0.963


Multiple sequence alignment