Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   ES968_RS02000 Genome accession   NZ_CP035395
Coordinates   386868..387266 (-) Length   132 a.a.
NCBI ID   WP_021481824.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103697     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 381868..392266
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES968_RS01965 (ES968_01965) - 382732..382929 (+) 198 Protein_337 hypothetical protein -
  ES968_RS01970 (ES968_01970) - 382966..383286 (+) 321 Protein_338 RDD family protein -
  ES968_RS01975 (ES968_01975) yckD 383368..383700 (+) 333 WP_015252849.1 YckD family protein -
  ES968_RS01980 (ES968_01980) - 383828..384250 (+) 423 WP_201449129.1 MarR family transcriptional regulator -
  ES968_RS01985 (ES968_01985) - 384238..384579 (+) 342 WP_032724911.1 DUF3147 family protein -
  ES968_RS01990 (ES968_01990) - 384598..385326 (+) 729 WP_046160039.1 AAA family ATPase -
  ES968_RS01995 (ES968_01995) bglC 385398..386831 (+) 1434 WP_046160040.1 6-phospho-beta-glucosidase -
  ES968_RS02000 (ES968_02000) nin/comJ 386868..387266 (-) 399 WP_021481824.1 DNA-entry nuclease inhibitor Regulator
  ES968_RS02005 (ES968_02005) nucA/comI 387293..387742 (-) 450 WP_014475770.1 DNA-entry nuclease Machinery gene
  ES968_RS02010 (ES968_02010) tlpC 387910..389631 (-) 1722 Protein_346 methyl-accepting chemotaxis protein TlpC -
  ES968_RS02015 (ES968_02015) hxlB 389742..390299 (-) 558 WP_014478803.1 6-phospho-3-hexuloisomerase -
  ES968_RS02020 (ES968_02020) hxlA 390305..390937 (-) 633 WP_129134177.1 3-hexulose-6-phosphate synthase -
  ES968_RS02025 (ES968_02025) hxlR 391169..391531 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14962.93 Da        Isoelectric Point: 4.8991

>NTDB_id=339829 ES968_RS02000 WP_021481824.1 386868..387266(-) (nin/comJ) [Bacillus subtilis strain SRCM103697]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=339829 ES968_RS02000 WP_021481824.1 386868..387266(-) (nin/comJ) [Bacillus subtilis strain SRCM103697]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992

Multiple sequence alignment