Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | F3K20_RS24025 | Genome accession | NZ_CP043956 |
| Coordinates | 5480356..5480955 (+) | Length | 199 a.a. |
| NCBI ID | WP_013001867.1 | Uniprot ID | C9Z3Z6 |
| Organism | Streptomyces sp. LBUM 1482 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 5475356..5485955
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F3K20_RS24005 (F3K20_24355) | - | 5475780..5476265 (+) | 486 | WP_013001871.1 | helix-turn-helix domain-containing protein | - |
| F3K20_RS24010 (F3K20_24360) | - | 5476382..5478568 (+) | 2187 | WP_210525004.1 | serine/threonine-protein kinase | - |
| F3K20_RS24015 (F3K20_24365) | - | 5478855..5479622 (-) | 768 | WP_013001869.1 | SLATT domain-containing protein | - |
| F3K20_RS24020 (F3K20_24370) | - | 5479898..5480245 (+) | 348 | WP_013001868.1 | YbaB/EbfC family nucleoid-associated protein | - |
| F3K20_RS24025 (F3K20_24375) | recR | 5480356..5480955 (+) | 600 | WP_013001867.1 | recombination mediator RecR | Machinery gene |
| F3K20_RS24030 (F3K20_24380) | - | 5480948..5481613 (+) | 666 | WP_013001866.1 | DUF5063 domain-containing protein | - |
| F3K20_RS24035 (F3K20_24385) | - | 5481799..5484300 (+) | 2502 | WP_158953035.1 | tetratricopeptide repeat protein | - |
| F3K20_RS24040 | - | 5484372..5484935 (+) | 564 | WP_013001864.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 21746.11 Da Isoelectric Point: 5.1616
>NTDB_id=339810 F3K20_RS24025 WP_013001867.1 5480356..5480955(+) (recR) [Streptomyces sp. LBUM 1482]
MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKAKVRFCATCGNVAQEELCGICRDSRRDVTV
ICVVEEPKDVVAIERTREFRGTYHVLGGAISPIEGVGPDDLRIRELLARLADGRVTELILATDPNLEGEATATYLARMIK
PMGLKVTRLASGLPVGGDLEYADEVTLGRAFEGRRLLDV
MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKAKVRFCATCGNVAQEELCGICRDSRRDVTV
ICVVEEPKDVVAIERTREFRGTYHVLGGAISPIEGVGPDDLRIRELLARLADGRVTELILATDPNLEGEATATYLARMIK
PMGLKVTRLASGLPVGGDLEYADEVTLGRAFEGRRLLDV
Nucleotide
Download Length: 600 bp
>NTDB_id=339810 F3K20_RS24025 WP_013001867.1 5480356..5480955(+) (recR) [Streptomyces sp. LBUM 1482]
GTGTACGAAGGCGTGGTCCAGGACCTCATCGACGAGCTGGGGCGGCTGCCCGGCGTCGGTCCCAAGAGCGCGCAGCGGAT
CGCCTTCCACATCCTGCAGGCGGAGCCGACGGACGTCCGGCGGCTGGCGCACGCGCTCCTCGAAGTGAAGGCGAAGGTCC
GCTTCTGCGCCACCTGCGGCAACGTCGCGCAGGAGGAGCTGTGCGGGATCTGCCGCGACTCCCGCCGTGACGTCACGGTC
ATCTGTGTCGTGGAGGAGCCGAAGGACGTCGTGGCGATCGAACGCACCCGCGAGTTCCGGGGCACGTACCACGTCCTCGG
CGGCGCGATCAGCCCGATCGAGGGCGTCGGCCCCGACGACCTGCGCATACGGGAGCTGCTGGCCCGCCTGGCCGACGGCA
GGGTCACCGAGCTGATCCTGGCCACGGACCCGAATCTCGAAGGCGAGGCCACGGCCACGTACCTCGCCCGCATGATCAAA
CCCATGGGCCTCAAGGTCACCCGCCTGGCCAGCGGCCTCCCGGTGGGCGGCGACCTGGAATACGCGGACGAGGTGACCCT
CGGCCGCGCCTTCGAGGGGAGACGATTGCTGGATGTCTGA
GTGTACGAAGGCGTGGTCCAGGACCTCATCGACGAGCTGGGGCGGCTGCCCGGCGTCGGTCCCAAGAGCGCGCAGCGGAT
CGCCTTCCACATCCTGCAGGCGGAGCCGACGGACGTCCGGCGGCTGGCGCACGCGCTCCTCGAAGTGAAGGCGAAGGTCC
GCTTCTGCGCCACCTGCGGCAACGTCGCGCAGGAGGAGCTGTGCGGGATCTGCCGCGACTCCCGCCGTGACGTCACGGTC
ATCTGTGTCGTGGAGGAGCCGAAGGACGTCGTGGCGATCGAACGCACCCGCGAGTTCCGGGGCACGTACCACGTCCTCGG
CGGCGCGATCAGCCCGATCGAGGGCGTCGGCCCCGACGACCTGCGCATACGGGAGCTGCTGGCCCGCCTGGCCGACGGCA
GGGTCACCGAGCTGATCCTGGCCACGGACCCGAATCTCGAAGGCGAGGCCACGGCCACGTACCTCGCCCGCATGATCAAA
CCCATGGGCCTCAAGGTCACCCGCCTGGCCAGCGGCCTCCCGGTGGGCGGCGACCTGGAATACGCGGACGAGGTGACCCT
CGGCCGCGCCTTCGAGGGGAGACGATTGCTGGATGTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Bacillus subtilis subsp. subtilis str. 168 |
55.102 |
98.492 |
0.543 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
54.124 |
97.487 |
0.528 |
| recR | Streptococcus pneumoniae R6 |
47.423 |
97.487 |
0.462 |