Detailed information NTG0339765

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: F3P16_RS19155
• Genome accession: NZ_CP043953
• Coordinates: 3624154..3625014 (+)
• Length: 286 a.a.
• NCBI ID: WP_150205247.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain K09-14
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3619154..3630014

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F3P16_RS17040 (F3P16_17040)	secG	3619759..3620088 (-)	330	WP_000555570.1	preprotein translocase subunit SecG	-
F3P16_RS17045 (F3P16_17045)	tpiA	3620101..3620895 (-)	795	WP_150205244.1	triose-phosphate isomerase	-
F3P16_RS17050 (F3P16_17050)	pilB	3621186..3622898 (+)	1713	WP_150205245.1	type IV-A pilus assembly ATPase PilB	Machinery gene
F3P16_RS17055 (F3P16_17055)	pilC	3622928..3624154 (+)	1227	WP_150205246.1	type II secretion system F family protein	Machinery gene
F3P16_RS19155 (F3P16_17060)	pilD	3624154..3625014 (+)	861	WP_150205247.1	prepilin peptidase	Machinery gene
F3P16_RS17065 (F3P16_17065)	coaE	3625016..3625612 (+)	597	WP_000874127.1	dephospho-CoA kinase	-
F3P16_RS17070 (F3P16_17070)	-	3625609..3626523 (-)	915	WP_000075011.1	DMT family transporter	-
F3P16_RS17075 (F3P16_17075)	rlmB	3626559..3627308 (-)	750	WP_001118149.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
F3P16_RS17080 (F3P16_17080)	-	3627410..3627736 (-)	327	WP_000099685.1	pyrimidine/purine nucleoside phosphorylase	-
F3P16_RS17085 (F3P16_17085)	-	3627813..3629123 (-)	1311	WP_150205248.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 31998.38 Da
• Isoelectric Point: 6.2059

>NTDB_id=339765 F3P16_RS19155 WP_150205247.1 3624154..3625014(+) (pilD) [Acinetobacter baumannii strain K09-14]
MQDIIAYFIQNLTALYIAVALVSLCIGSFLNVVIYRTPKMMEQDWQQECQMLLNPEQPIIDHEKLTLSKPASSCPACEQP
IPWYQNIPVISWLVLRGKCGHCQHPISIRYPAIELLTMLCSLVVVMVFGPTIQMLFGLVLTWVLIALTFIDFDTQLLPDR
FTLPLAALGLGINTFNIYTSPNSAIWGYLIGFLCLWIVYYLFKVITGKEGMGYGDFKLLAALGAWMGPLMLPLIVLLSSL
LGAIIGIILLKLRNDNQPFAFGPYIAIAGWVAFLWGDQIMKIYLGG

Nucleotide

• Length: 861 bp

>NTDB_id=339765 F3P16_RS19155 WP_150205247.1 3624154..3625014(+) (pilD) [Acinetobacter baumannii strain K09-14]
ATGCAAGACATCATTGCGTATTTTATTCAAAACTTAACTGCACTTTATATTGCTGTTGCACTCGTGAGCCTATGTATCGG
TAGCTTTCTTAATGTAGTGATTTACCGCACGCCAAAAATGATGGAACAAGATTGGCAGCAAGAATGCCAAATGTTACTCA
ATCCTGAGCAACCGATTATTGATCATGAGAAGTTAACTTTAAGTAAGCCTGCTTCATCGTGCCCTGCATGTGAGCAACCG
ATCCCTTGGTATCAAAATATTCCTGTTATAAGCTGGCTTGTGTTAAGAGGAAAATGTGGTCATTGCCAGCACCCAATCAG
TATTCGCTATCCAGCCATCGAACTACTCACCATGCTATGTTCATTAGTAGTAGTCATGGTGTTTGGCCCAACCATACAAA
TGCTTTTTGGACTCGTCCTCACATGGGTACTGATAGCCCTTACTTTTATTGATTTCGATACACAATTATTGCCTGATCGC
TTTACCTTACCTTTAGCTGCGCTCGGCTTAGGTATTAATACCTTTAATATTTATACCTCACCCAACTCAGCCATTTGGGG
TTATCTCATTGGTTTCCTATGTCTTTGGATTGTCTATTACTTATTTAAAGTGATCACTGGCAAAGAAGGTATGGGCTACG
GCGACTTTAAATTGCTTGCAGCATTAGGTGCATGGATGGGGCCATTGATGCTGCCGTTAATTGTGTTATTGTCATCGTTA
CTTGGCGCAATCATTGGCATCATTTTATTAAAATTAAGAAATGACAATCAGCCTTTTGCTTTTGGGCCATATATTGCCAT
TGCTGGTTGGGTTGCCTTTTTATGGGGTGATCAGATTATGAAAATTTATTTGGGAGGTTAA

Domains

Predicted by InterProScan.

• Type IV leader peptidase family (Peptidase_A24) (138-247)

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (22-128)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter baumannii D1279779	98.601	100	0.986
pilD	Acinetobacter nosocomialis M2	98.601	100	0.986
pilD	Vibrio cholerae strain A1552	53.309	95.105	0.507
pilD	Vibrio campbellii strain DS40M4	52.399	94.755	0.497
pilD	Neisseria gonorrhoeae MS11	47.348	92.308	0.437