Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   ES966_RS15905 Genome accession   NZ_CP035393
Coordinates   3172280..3173266 (-) Length   328 a.a.
NCBI ID   WP_269321599.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM103691     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3167280..3178266
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES966_RS15870 (ES966_15870) - 3167536..3168012 (+) 477 WP_129093768.1 Na+/H+ antiporter subunit E -
  ES966_RS15875 (ES966_15875) - 3168012..3168296 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  ES966_RS15880 (ES966_15880) mnhG 3168280..3168654 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  ES966_RS15885 (ES966_15885) - 3168694..3169077 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  ES966_RS15890 (ES966_15890) comA 3169099..3169743 (-) 645 WP_129093769.1 response regulator transcription factor Regulator
  ES966_RS15895 (ES966_15895) comP 3169824..3172127 (-) 2304 WP_070082286.1 histidine kinase Regulator
  ES966_RS15900 (ES966_15900) comX 3172147..3172326 (-) 180 WP_318010531.1 competence pheromone ComX -
  ES966_RS15905 (ES966_15905) comQ 3172280..3173266 (-) 987 WP_269321599.1 class 1 isoprenoid biosynthesis enzyme Regulator
  ES966_RS15910 (ES966_15910) degQ 3173397..3173537 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  ES966_RS15920 (ES966_15920) - 3174002..3174343 (+) 342 WP_021495366.1 hypothetical protein -
  ES966_RS15925 (ES966_15925) - 3174350..3175573 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  ES966_RS15930 (ES966_15930) - 3175703..3177169 (-) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -
  ES966_RS15935 (ES966_15935) - 3177187..3177738 (-) 552 WP_017419426.1 isochorismatase family cysteine hydrolase -
  ES966_RS15940 (ES966_15940) - 3177835..3178233 (-) 399 WP_003152031.1 DUF1694 domain-containing protein -

Sequence


Protein


Download         Length: 328 a.a.        Molecular weight: 37795.36 Da        Isoelectric Point: 5.6937

>NTDB_id=339723 ES966_RS15905 WP_269321599.1 3172280..3173266(-) (comQ) [Bacillus velezensis strain SRCM103691]
MKTIIEQMCLDANQIKNRMKSIIERNIFNEHLMQLLLRFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLT
SDIIDDLEDEDNRDAPWMKIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPETEDECLE
VIKLKCGSLFALANVTGTLLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQEL
LRIFSDQKLYSQLRLNKKEFIQKLYDSGASQYVSVLYQLYMHKCGTEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEF
NKLFFELS

Nucleotide


Download         Length: 987 bp        

>NTDB_id=339723 ES966_RS15905 WP_269321599.1 3172280..3173266(-) (comQ) [Bacillus velezensis strain SRCM103691]
GTGAAGACAATTATTGAGCAAATGTGTTTAGATGCCAACCAAATCAAGAATAGAATGAAGAGTATAATAGAGCGGAACAT
ATTTAATGAACATCTAATGCAGCTCCTTCTTCGTTTTATTGAACCAAAAAAAAATTTTTCTCTAGCTGAATCAGCTGTTT
TGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTGCCGCTATTGAAATTCTTACACTTACT
TCCGATATAATTGATGATCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATGAAGATAGATCGTTCACTAGCATTAAG
TGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTACGAATCCTTTAGTGATTAAGTATGTAT
TAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAACCAGAGACAGAAGATGAATGTTTAGAG
GTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACGCTTTTAGCAACTGGAGAATTCAATAA
GTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGTGATTATCATGCTATTTTTAAGGATAATA
CTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCTTGTTTAATAAGTCTTCTCAAGAATTG
CTTCGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAAGAGTTTATTCAAAAGCTGTATGATTC
TGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGCATAAGTGTGGAACTGAAGTTGAAAATTTAAATTTAG
ATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATAAGAAGGATGATGAAGATGCAGAATTT
AATAAATTATTTTTTGAATTATCCTGA

Domains


Predicted by InterproScan.

(59-245)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

61.246

88.11

0.54


Multiple sequence alignment