Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   ES966_RS05935 Genome accession   NZ_CP035393
Coordinates   1141964..1142917 (+) Length   317 a.a.
NCBI ID   WP_017417445.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM103691     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1136964..1147917
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES966_RS05900 (ES966_05900) argF 1137489..1138460 (+) 972 WP_017417442.1 ornithine carbamoyltransferase -
  ES966_RS05905 (ES966_05905) - 1138561..1139711 (+) 1151 WP_087614160.1 IS3 family transposase -
  ES966_RS05910 (ES966_05910) - 1139827..1140006 (+) 180 WP_003155070.1 YjzC family protein -
  ES966_RS05915 (ES966_05915) - 1140043..1140228 (-) 186 WP_007409129.1 YjzD family protein -
  ES966_RS05925 (ES966_05925) - 1140489..1141224 (+) 736 Protein_1092 hypothetical protein -
  ES966_RS05930 (ES966_05930) - 1141307..1141873 (+) 567 WP_032863798.1 hypothetical protein -
  ES966_RS05935 (ES966_05935) med 1141964..1142917 (+) 954 WP_017417445.1 BMP family ABC transporter substrate-binding protein Regulator
  ES966_RS05940 (ES966_05940) comZ 1142930..1143121 (+) 192 WP_003155061.1 ComZ family protein Regulator
  ES966_RS05945 (ES966_05945) - 1143150..1143368 (-) 219 WP_007409123.1 hypothetical protein -
  ES966_RS05950 (ES966_05950) - 1143536..1144474 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  ES966_RS05955 (ES966_05955) fabF 1144496..1145734 (+) 1239 WP_007610580.1 beta-ketoacyl-ACP synthase II -
  ES966_RS05960 (ES966_05960) - 1145818..1146603 (+) 786 WP_017417447.1 DUF2268 domain-containing protein -
  ES966_RS05965 (ES966_05965) - 1146777..1147763 (+) 987 WP_017417448.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 35359.98 Da        Isoelectric Point: 4.6686

>NTDB_id=339683 ES966_RS05935 WP_017417445.1 1141964..1142917(+) (med) [Bacillus velezensis strain SRCM103691]
MITRLVMTFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKNNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYLAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=339683 ES966_RS05935 WP_017417445.1 1141964..1142917(+) (med) [Bacillus velezensis strain SRCM103691]
TTGATCACCAGGCTTGTCATGACCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATTTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGCTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAAACAATGAGGTCGGCGTCATCGCCTCTTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGAGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCTGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAACAGAACAAATGAACTGCCGTCAAATGAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

77.603

100

0.776


Multiple sequence alignment