Detailed information NTG0339684

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: F3J96_RS24560
• Genome accession: NZ_CP043950
• Coordinates: 4925885..4926868 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain ST95-32
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4920885..4931868

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F3J96_RS24515 (F3J96_24520)	-	4921554..4921661 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
F3J96_RS24520 (F3J96_24525)	-	4922036..4922143 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
F3J96_RS24530 (F3J96_24535)	-	4922518..4922625 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
F3J96_RS24540 (F3J96_24545)	-	4923000..4923107 (-)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
F3J96_RS24550 (F3J96_24555)	yhjV	4923583..4924854 (+)	1272	WP_001332306.1	aromatic amino acid transport family protein	-
F3J96_RS24555 (F3J96_24560)	dppF	4924884..4925888 (-)	1005	WP_000103579.1	dipeptide ABC transporter ATP-binding subunit DppF	-
F3J96_RS24560 (F3J96_24565)	amiE	4925885..4926868 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
F3J96_RS24565 (F3J96_24570)	dppC	4926879..4927781 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
F3J96_RS24570 (F3J96_24575)	dppB	4927791..4928810 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
F3J96_RS24580 (F3J96_24585)	dppA	4928961..4930568 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=339684 F3J96_RS24560 WP_001196477.1 4925885..4926868(-) (amiE) [Escherichia coli strain ST95-32]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=339684 F3J96_RS24560 WP_001196477.1 4925885..4926868(-) (amiE) [Escherichia coli strain ST95-32]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTAAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404