Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   ES965_RS19435 Genome accession   NZ_CP035391
Coordinates   3730987..3731106 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain SRCM103689     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3725987..3736106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES965_RS19410 (ES965_19410) albG 3726150..3726851 (+) 702 WP_029726080.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  ES965_RS19415 (ES965_19415) ywhL 3726857..3728233 (-) 1377 WP_124059357.1 YncE family protein -
  ES965_RS19420 (ES965_19420) ywhK 3728273..3729628 (-) 1356 WP_129092780.1 YncE family protein -
  ES965_RS22010 (ES965_19425) - 3729625..3729855 (-) 231 WP_129092781.1 hypothetical protein -
  ES965_RS19430 (ES965_19430) rapF 3729858..3731003 (+) 1146 WP_015250985.1 response regulator aspartate phosphatase RapF Regulator
  ES965_RS19435 (ES965_19435) phrF 3730987..3731106 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  ES965_RS19440 (ES965_19440) - 3731334..3731810 (+) 477 WP_015384936.1 hypothetical protein -
  ES965_RS19445 (ES965_19445) - 3732058..3732756 (+) 699 WP_250635524.1 hypothetical protein -
  ES965_RS19460 (ES965_19460) - 3734232..3734879 (+) 648 WP_129092783.1 ABC transporter ATP-binding protein -
  ES965_RS19465 (ES965_19465) - 3734872..3735435 (+) 564 WP_129092784.1 hypothetical protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=339659 ES965_RS19435 WP_009968329.1 3730987..3731106(+) (phrF) [Bacillus subtilis strain SRCM103689]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=339659 ES965_RS19435 WP_009968329.1 3730987..3731106(+) (phrF) [Bacillus subtilis strain SRCM103689]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment