Detailed information    

insolico Bioinformatically predicted

Overview


Name   comZ   Type   Regulator
Locus tag   ES965_RS06115 Genome accession   NZ_CP035391
Coordinates   1175177..1175368 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain SRCM103689     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context


Location: 1170177..1180368
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES965_RS06085 (ES965_06085) argF 1171039..1171998 (+) 960 WP_032721338.1 ornithine carbamoyltransferase -
  ES965_RS06090 (ES965_06090) yjzC 1172084..1172263 (+) 180 WP_003245356.1 YjzC family protein -
  ES965_RS06095 (ES965_06095) yjzD 1172310..1172495 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  ES965_RS06100 (ES965_06100) - 1172745..1173479 (+) 735 WP_032721340.1 hypothetical protein -
  ES965_RS06105 (ES965_06105) - 1173561..1174118 (+) 558 WP_124059718.1 hypothetical protein -
  ES965_RS06110 (ES965_06110) med 1174209..1175162 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  ES965_RS06115 (ES965_06115) comZ 1175177..1175368 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  ES965_RS06120 (ES965_06120) yjzB 1175398..1175634 (-) 237 WP_015383342.1 spore coat protein YjzB -
  ES965_RS06125 (ES965_06125) fabH 1175799..1176737 (+) 939 WP_129092391.1 beta-ketoacyl-ACP synthase III -
  ES965_RS06130 (ES965_06130) fabF 1176760..1178001 (+) 1242 WP_087961191.1 beta-ketoacyl-ACP synthase II -
  ES965_RS06135 (ES965_06135) yjaZ 1178077..1178862 (+) 786 WP_124059719.1 DUF2268 domain-containing protein -
  ES965_RS06140 (ES965_06140) appD 1179054..1180040 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=339603 ES965_RS06115 WP_003224559.1 1175177..1175368(+) (comZ) [Bacillus subtilis strain SRCM103689]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=339603 ES965_RS06115 WP_003224559.1 1175177..1175368(+) (comZ) [Bacillus subtilis strain SRCM103689]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATACAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains


Predicted by InterproScan.

(4-58)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment