Detailed information NTG0339602

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ES965_RS06110
• Genome accession: NZ_CP035391
• Coordinates: 1174209..1175162 (+)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain SRCM103689
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1169209..1180162

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ES965_RS06085 (ES965_06085)	argF	1171039..1171998 (+)	960	WP_032721338.1	ornithine carbamoyltransferase	-
ES965_RS06090 (ES965_06090)	yjzC	1172084..1172263 (+)	180	WP_003245356.1	YjzC family protein	-
ES965_RS06095 (ES965_06095)	yjzD	1172310..1172495 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
ES965_RS06100 (ES965_06100)	-	1172745..1173479 (+)	735	WP_032721340.1	hypothetical protein	-
ES965_RS06105 (ES965_06105)	-	1173561..1174118 (+)	558	WP_124059718.1	hypothetical protein	-
ES965_RS06110 (ES965_06110)	med	1174209..1175162 (+)	954	WP_014476425.1	transcriptional regulator Med	Regulator
ES965_RS06115 (ES965_06115)	comZ	1175177..1175368 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
ES965_RS06120 (ES965_06120)	yjzB	1175398..1175634 (-)	237	WP_015383342.1	spore coat protein YjzB	-
ES965_RS06125 (ES965_06125)	fabH	1175799..1176737 (+)	939	WP_129092391.1	beta-ketoacyl-ACP synthase III	-
ES965_RS06130 (ES965_06130)	fabF	1176760..1178001 (+)	1242	WP_087961191.1	beta-ketoacyl-ACP synthase II	-
ES965_RS06135 (ES965_06135)	yjaZ	1178077..1178862 (+)	786	WP_124059719.1	DUF2268 domain-containing protein	-
ES965_RS06140 (ES965_06140)	appD	1179054..1180040 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=339602 ES965_RS06110 WP_014476425.1 1174209..1175162(+) (med) [Bacillus subtilis strain SRCM103689]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=339602 ES965_RS06110 WP_014476425.1 1174209..1175162(+) (med) [Bacillus subtilis strain SRCM103689]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGTCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTCAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTCCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTATGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATA
AAGACTTTCAGCAAAGAATCGCTAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997