Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   ES965_RS01970 Genome accession   NZ_CP035391
Coordinates   362911..363309 (-) Length   132 a.a.
NCBI ID   WP_015252845.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103689     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 357911..368309
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES965_RS01940 (ES965_01940) yckA 358490..359170 (-) 681 WP_086343438.1 amino acid ABC transporter permease -
  ES965_RS01945 (ES965_01945) yckB 359180..360043 (-) 864 WP_086343439.1 transporter substrate-binding domain-containing protein -
  ES965_RS01950 (ES965_01950) - 360204..360400 (+) 197 Protein_335 hypothetical protein -
  ES965_RS01955 (ES965_01955) yckC 360419..360874 (+) 456 WP_064672016.1 RDD family protein -
  ES965_RS01960 (ES965_01960) yckD 360956..361288 (+) 333 WP_015252849.1 YckD family protein -
  ES965_RS01965 (ES965_01965) bglC 361441..362874 (+) 1434 WP_086343440.1 6-phospho-beta-glucosidase -
  ES965_RS01970 (ES965_01970) nin/comJ 362911..363309 (-) 399 WP_015252845.1 DNA-entry nuclease inhibitor Regulator
  ES965_RS01975 (ES965_01975) nucA/comI 363336..363785 (-) 450 WP_124060108.1 DNA-entry nuclease Machinery gene
  ES965_RS01980 (ES965_01980) tlpC 363953..365674 (-) 1722 WP_124060107.1 methyl-accepting chemotaxis protein TlpC -
  ES965_RS01985 (ES965_01985) hxlB 365785..366342 (-) 558 WP_024572182.1 6-phospho-3-hexuloisomerase -
  ES965_RS01990 (ES965_01990) hxlA 366348..366980 (-) 633 WP_024572183.1 3-hexulose-6-phosphate synthase -
  ES965_RS01995 (ES965_01995) hxlR 367214..367576 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14935.86 Da        Isoelectric Point: 4.7078

>NTDB_id=339588 ES965_RS01970 WP_015252845.1 362911..363309(-) (nin/comJ) [Bacillus subtilis strain SRCM103689]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVNSYETKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=339588 ES965_RS01970 WP_015252845.1 362911..363309(-) (nin/comJ) [Bacillus subtilis strain SRCM103689]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAACAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

98.485

100

0.985

Multiple sequence alignment