Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   AT571_RS08660 Genome accession   NZ_CP043910
Coordinates   1806699..1807334 (-) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain AB043     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1801699..1812334
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AT571_RS08645 (AT571_08645) - 1802486..1803670 (+) 1185 WP_000939111.1 S41 family peptidase -
  AT571_RS08650 (AT571_08650) - 1803674..1805095 (-) 1422 WP_049594865.1 sigma-54-dependent transcriptional regulator -
  AT571_RS08655 (AT571_08655) pilS 1805120..1806688 (-) 1569 WP_001160327.1 sensor histidine kinase Regulator
  AT571_RS08660 (AT571_08660) letA 1806699..1807334 (-) 636 WP_000633799.1 response regulator Regulator
  AT571_RS08665 (AT571_08665) pbpG 1807547..1808593 (+) 1047 WP_005140205.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  AT571_RS08670 (AT571_08670) thrC 1808702..1809841 (-) 1140 WP_000063593.1 threonine synthase -
  AT571_RS08675 (AT571_08675) - 1809897..1811198 (-) 1302 WP_000805827.1 homoserine dehydrogenase -
  AT571_RS08680 (AT571_08680) - 1811443..1812258 (-) 816 WP_000011166.1 DsbC family protein -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=339319 AT571_RS08660 WP_000633799.1 1806699..1807334(-) (letA) [Acinetobacter baumannii strain AB043]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=339319 AT571_RS08660 WP_000633799.1 1806699..1807334(-) (letA) [Acinetobacter baumannii strain AB043]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAATATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACAAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55