Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | EQ029_RS06410 | Genome accession | NZ_CP035291 |
| Coordinates | 1323646..1324620 (+) | Length | 324 a.a. |
| NCBI ID | WP_011275668.1 | Uniprot ID | - |
| Organism | Staphylococcus haemolyticus strain ATCC 29970 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1318646..1329620
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQ029_RS06375 (EQ029_06390) | rpmG | 1319078..1319227 (+) | 150 | WP_057504820.1 | 50S ribosomal protein L33 | - |
| EQ029_RS06380 (EQ029_06395) | - | 1319464..1320000 (+) | 537 | WP_011275662.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| EQ029_RS06385 (EQ029_06400) | - | 1320016..1321473 (+) | 1458 | WP_011275663.1 | rhomboid family intramembrane serine protease | - |
| EQ029_RS06390 (EQ029_06405) | - | 1321457..1321660 (+) | 204 | WP_011275664.1 | YqgQ family protein | - |
| EQ029_RS06395 (EQ029_06410) | - | 1321657..1322643 (+) | 987 | WP_037558191.1 | ROK family glucokinase | - |
| EQ029_RS06400 (EQ029_06415) | - | 1322643..1322966 (+) | 324 | WP_011275666.1 | MTH1187 family thiamine-binding protein | - |
| EQ029_RS06405 (EQ029_06420) | - | 1322968..1323594 (+) | 627 | WP_011275667.1 | MBL fold metallo-hydrolase | - |
| EQ029_RS06410 (EQ029_06425) | comGA | 1323646..1324620 (+) | 975 | WP_011275668.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EQ029_RS06415 (EQ029_06430) | comGB | 1324592..1325656 (+) | 1065 | WP_037558195.1 | competence type IV pilus assembly protein ComGB | - |
| EQ029_RS06420 (EQ029_06435) | comGC | 1325670..1325990 (+) | 321 | WP_057504819.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EQ029_RS06425 (EQ029_06440) | comGD | 1326055..1326423 (+) | 369 | WP_123955564.1 | competence type IV pilus minor pilin ComGD | - |
| EQ029_RS06430 (EQ029_06445) | - | 1326404..1326703 (+) | 300 | WP_037558199.1 | hypothetical protein | - |
| EQ029_RS06445 (EQ029_06460) | - | 1327272..1327790 (+) | 519 | WP_037558203.1 | shikimate kinase | - |
| EQ029_RS06450 (EQ029_06465) | gcvT | 1327979..1329070 (+) | 1092 | WP_011275675.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37137.14 Da Isoelectric Point: 8.6557
>NTDB_id=338988 EQ029_RS06410 WP_011275668.1 1323646..1324620(+) (comGA) [Staphylococcus haemolyticus strain ATCC 29970]
MKLLFREIVNKAISKNASDIHFIPTVDEVHIKFRINDYLELYEIFNLDVYQKLLVFMKFKSGLDVSSHQSAQSGRYTYQA
KSTFYLRISTLPLSLGIESCVIRIIPQYFQAKKEYKEFNDFKHLVNKKQGLILLTGPTGSGKSTLMYQMVLHAYKELNLN
VITIENPVEQLLKGITQISINKKAGIDYVSSFKAILRCDPDIILIGEIRDAEVAKCVIQASLSGHLVLSTMHSTNCRGAL
LRLLEMGISIQELTQSINIISNQRLITTTQNERRLICETIDKKQIQFFFEHEQTMPHNFNNLQQQLNLLSKEGTICEDTA
SKYF
MKLLFREIVNKAISKNASDIHFIPTVDEVHIKFRINDYLELYEIFNLDVYQKLLVFMKFKSGLDVSSHQSAQSGRYTYQA
KSTFYLRISTLPLSLGIESCVIRIIPQYFQAKKEYKEFNDFKHLVNKKQGLILLTGPTGSGKSTLMYQMVLHAYKELNLN
VITIENPVEQLLKGITQISINKKAGIDYVSSFKAILRCDPDIILIGEIRDAEVAKCVIQASLSGHLVLSTMHSTNCRGAL
LRLLEMGISIQELTQSINIISNQRLITTTQNERRLICETIDKKQIQFFFEHEQTMPHNFNNLQQQLNLLSKEGTICEDTA
SKYF
Nucleotide
Download Length: 975 bp
>NTDB_id=338988 EQ029_RS06410 WP_011275668.1 1323646..1324620(+) (comGA) [Staphylococcus haemolyticus strain ATCC 29970]
TTGAAACTATTATTCAGAGAGATAGTTAATAAAGCTATTTCAAAAAATGCGAGTGACATACATTTTATTCCTACAGTTGA
TGAAGTTCATATTAAATTTAGAATTAATGATTACCTTGAACTTTATGAAATATTCAACTTAGATGTATATCAAAAATTAT
TAGTATTTATGAAGTTCAAATCAGGTTTGGACGTTTCATCTCATCAATCCGCTCAAAGTGGTCGTTATACTTATCAAGCT
AAATCTACTTTTTATTTACGGATTTCAACATTACCTTTGTCTTTAGGTATAGAAAGTTGTGTAATTAGGATAATTCCTCA
ATATTTTCAAGCAAAAAAAGAATATAAAGAATTTAACGATTTTAAACACTTAGTAAATAAAAAACAGGGATTAATTCTAT
TAACTGGACCCACAGGATCCGGAAAAAGCACTCTGATGTATCAAATGGTTCTACATGCATATAAAGAATTAAATCTTAAT
GTCATCACTATCGAAAACCCAGTTGAGCAATTACTAAAGGGAATTACTCAAATATCAATTAATAAAAAAGCAGGTATCGA
CTACGTAAGTTCATTTAAAGCTATATTAAGATGTGATCCTGATATTATTTTAATAGGTGAAATAAGAGACGCAGAAGTTG
CTAAATGTGTAATTCAAGCTAGTTTGAGTGGACATCTTGTATTATCAACTATGCATTCCACTAATTGTAGAGGTGCATTA
CTTCGATTACTTGAGATGGGAATTTCAATTCAAGAATTAACTCAATCGATCAATATCATTTCTAATCAAAGATTAATAAC
GACTACTCAGAATGAGCGTCGCTTAATTTGTGAAACAATAGATAAAAAGCAGATACAATTTTTCTTCGAGCATGAACAAA
CAATGCCACATAATTTTAATAATTTACAACAGCAATTAAATTTATTATCTAAAGAAGGAACAATTTGTGAAGATACTGCA
AGTAAATATTTTTAA
TTGAAACTATTATTCAGAGAGATAGTTAATAAAGCTATTTCAAAAAATGCGAGTGACATACATTTTATTCCTACAGTTGA
TGAAGTTCATATTAAATTTAGAATTAATGATTACCTTGAACTTTATGAAATATTCAACTTAGATGTATATCAAAAATTAT
TAGTATTTATGAAGTTCAAATCAGGTTTGGACGTTTCATCTCATCAATCCGCTCAAAGTGGTCGTTATACTTATCAAGCT
AAATCTACTTTTTATTTACGGATTTCAACATTACCTTTGTCTTTAGGTATAGAAAGTTGTGTAATTAGGATAATTCCTCA
ATATTTTCAAGCAAAAAAAGAATATAAAGAATTTAACGATTTTAAACACTTAGTAAATAAAAAACAGGGATTAATTCTAT
TAACTGGACCCACAGGATCCGGAAAAAGCACTCTGATGTATCAAATGGTTCTACATGCATATAAAGAATTAAATCTTAAT
GTCATCACTATCGAAAACCCAGTTGAGCAATTACTAAAGGGAATTACTCAAATATCAATTAATAAAAAAGCAGGTATCGA
CTACGTAAGTTCATTTAAAGCTATATTAAGATGTGATCCTGATATTATTTTAATAGGTGAAATAAGAGACGCAGAAGTTG
CTAAATGTGTAATTCAAGCTAGTTTGAGTGGACATCTTGTATTATCAACTATGCATTCCACTAATTGTAGAGGTGCATTA
CTTCGATTACTTGAGATGGGAATTTCAATTCAAGAATTAACTCAATCGATCAATATCATTTCTAATCAAAGATTAATAAC
GACTACTCAGAATGAGCGTCGCTTAATTTGTGAAACAATAGATAAAAAGCAGATACAATTTTTCTTCGAGCATGAACAAA
CAATGCCACATAATTTTAATAATTTACAACAGCAATTAAATTTATTATCTAAAGAAGGAACAATTTGTGAAGATACTGCA
AGTAAATATTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
65.325 |
99.691 |
0.651 |
| comGA | Staphylococcus aureus N315 |
65.325 |
99.691 |
0.651 |