Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EQ029_RS04145 | Genome accession | NZ_CP035291 |
| Coordinates | 871951..872349 (+) | Length | 132 a.a. |
| NCBI ID | WP_011275249.1 | Uniprot ID | A0A5B2YX53 |
| Organism | Staphylococcus haemolyticus strain ATCC 29970 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 866951..877349
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQ029_RS04115 (EQ029_04130) | atpD | 867098..868510 (+) | 1413 | WP_057504772.1 | F0F1 ATP synthase subunit beta | - |
| EQ029_RS04120 (EQ029_04135) | - | 868531..868932 (+) | 402 | WP_011275244.1 | F0F1 ATP synthase subunit epsilon | - |
| EQ029_RS04125 (EQ029_04140) | - | 869060..869293 (+) | 234 | WP_011275245.1 | DUF1146 family protein | - |
| EQ029_RS04130 (EQ029_04145) | murA | 869398..870663 (+) | 1266 | WP_033079610.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| EQ029_RS04135 (EQ029_04150) | fabZ | 870703..871140 (+) | 438 | WP_011275247.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| EQ029_RS04140 (EQ029_04155) | - | 871320..871763 (-) | 444 | WP_011275248.1 | YwpF-like family protein | - |
| EQ029_RS04145 (EQ029_04160) | ssb | 871951..872349 (+) | 399 | WP_011275249.1 | single-stranded DNA-binding protein | Machinery gene |
| EQ029_RS04150 (EQ029_04165) | - | 872688..873395 (+) | 708 | WP_011275250.1 | transglycosylase family protein | - |
| EQ029_RS04155 (EQ029_04170) | tenA | 873684..874373 (+) | 690 | WP_011275251.1 | thiaminase II | - |
| EQ029_RS04160 (EQ029_04175) | thiD | 874366..875187 (+) | 822 | WP_016931211.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| EQ029_RS04165 (EQ029_04180) | thiM | 875180..875971 (+) | 792 | WP_011275253.1 | hydroxyethylthiazole kinase | - |
| EQ029_RS04170 (EQ029_04185) | thiE | 875973..876611 (+) | 639 | WP_011275254.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 132 a.a. Molecular weight: 15141.05 Da Isoelectric Point: 4.7942
>NTDB_id=338977 EQ029_RS04145 WP_011275249.1 871951..872349(+) (ssb) [Staphylococcus haemolyticus strain ATCC 29970]
MLNKIVIVGRLTKKAQIFENEEVKIATFCVATERNYKDENNEIACDYIFCKAFGKTATNIESYTDQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSKNDNILPNTSYDEDAYSFDHLEVIDVN
MLNKIVIVGRLTKKAQIFENEEVKIATFCVATERNYKDENNEIACDYIFCKAFGKTATNIESYTDQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSKNDNILPNTSYDEDAYSFDHLEVIDVN
Nucleotide
Download Length: 399 bp
>NTDB_id=338977 EQ029_RS04145 WP_011275249.1 871951..872349(+) (ssb) [Staphylococcus haemolyticus strain ATCC 29970]
ATGCTAAATAAAATTGTGATAGTAGGTCGATTGACCAAAAAGGCACAAATATTTGAAAACGAGGAGGTGAAAATAGCTAC
GTTCTGTGTTGCAACTGAACGTAATTATAAAGATGAAAATAATGAAATAGCTTGTGATTATATTTTTTGTAAGGCATTTG
GTAAAACAGCAACAAATATAGAATCATATACAGACCAAGGCACTTTAGTTGGTATTACAGGACAAATGAGATCTCGTAAG
TACGATAAAGATGGCCAAACGCACTTTGTGACTGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATCTAAAAA
TGATAATATTCTTCCTAACACCTCATATGATGAAGACGCTTATTCCTTTGATCACCTTGAAGTGATTGATGTTAACTAA
ATGCTAAATAAAATTGTGATAGTAGGTCGATTGACCAAAAAGGCACAAATATTTGAAAACGAGGAGGTGAAAATAGCTAC
GTTCTGTGTTGCAACTGAACGTAATTATAAAGATGAAAATAATGAAATAGCTTGTGATTATATTTTTTGTAAGGCATTTG
GTAAAACAGCAACAAATATAGAATCATATACAGACCAAGGCACTTTAGTTGGTATTACAGGACAAATGAGATCTCGTAAG
TACGATAAAGATGGCCAAACGCACTTTGTGACTGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATCTAAAAA
TGATAATATTCTTCCTAACACCTCATATGATGAAGACGCTTATTCCTTTGATCACCTTGAAGTGATTGATGTTAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
75.573 |
99.242 |
0.75 |
| ssb | Staphylococcus aureus MW2 |
74.809 |
99.242 |
0.742 |