Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   EQH18_RS02355 Genome accession   NZ_CP035262
Coordinates   471992..472723 (+) Length   243 a.a.
NCBI ID   WP_000889924.1    Uniprot ID   A0A0H2UNS3
Organism   Streptococcus pneumoniae strain TVO_1901923     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 466992..477723
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH18_RS02335 - 468551..469184 (+) 634 Protein_468 DJ-1/PfpI family protein -
  EQH18_RS02340 (EQH18_02490) dnaJ 469391..470527 (+) 1137 WP_001066295.1 molecular chaperone DnaJ -
  EQH18_RS02345 (EQH18_02500) - 471217..471504 (-) 288 WP_000777760.1 hypothetical protein -
  EQH18_RS02350 (EQH18_02505) - 471514..471924 (-) 411 WP_001278301.1 HIT family protein -
  EQH18_RS02355 (EQH18_02510) pptA 471992..472723 (+) 732 WP_000889924.1 ABC transporter ATP-binding protein Regulator
  EQH18_RS02360 (EQH18_02515) - 472720..473769 (+) 1050 WP_000653779.1 ABC transporter permease -
  EQH18_RS02365 (EQH18_02520) - 473937..474266 (-) 330 WP_000132572.1 hypothetical protein -
  EQH18_RS02370 (EQH18_02525) - 474543..474881 (+) 339 WP_000682132.1 LytTR family DNA-binding domain-containing protein -
  EQH18_RS02375 (EQH18_02530) comE/blpR 474886..475623 (+) 738 WP_001219146.1 response regulator transcription factor Regulator
  EQH18_RS02380 (EQH18_02535) - 475637..476977 (+) 1341 WP_001099895.1 sensor histidine kinase -
  EQH18_RS02385 (EQH18_02540) blpC 477022..477177 (-) 156 WP_000358814.1 quorum-sensing system pheromone BlpC -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27042.52 Da        Isoelectric Point: 4.7792

>NTDB_id=338444 EQH18_RS02355 WP_000889924.1 471992..472723(+) (pptA) [Streptococcus pneumoniae strain TVO_1901923]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLAPYSGSININGLTLQGDATSYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFERVEPLLKMFRLEQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAISDLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRSKGNLLQLREAFDMPEASLNDIYLALTKE
EDL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=338444 EQH18_RS02355 WP_000889924.1 471992..472723(+) (pptA) [Streptococcus pneumoniae strain TVO_1901923]
ATGTTAGAAATTAAAAACCTGACAGGTGGCTATGTTCATGTTCCTGTTTTGAAAGATGTGTCCTTTACTGTTGAAAGTGG
GCAGTTGGTCGGTTTGATTGGTCTCAATGGTGCTGGGAAATCAACGACGATCAATGAGATTATCGGTCTGTTGGCACCTT
ATAGTGGCTCCATCAATATCAATGGCCTGACTCTGCAAGGAGATGCGACTAGCTACCGCAAGCAGATTGGCTACATTCCT
GAGACGCCTAGTCTGTATGAGGAATTGACCCTCAGAGAGCATATCGAAACGGTTGCTATGGCTTACGGTATTGAGCAAAA
AGTGGCTTTCGAACGAGTAGAGCCCTTGTTAAAAATGTTCCGTTTGGAACAGAAATTAGACTGGTTCCCTGTTCATTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCTTTTGTGGTGGATCCAAGTCTTTTCATCGTGGATGAGCCTTTC
CTTGGTCTTGATCCGCTGGCTATTTCTGATTTGATTCAGCTTTTGGAAGTGGAGAAGCAAAAGGGCAAGTCTATTCTCAT
GAGTACCCACGTGCTGGATTCGGCGGAGAAGATGTGTGATGCCTTTGTCATTCTTCACAAGGGAGAGGTGCGTTCCAAAG
GCAATCTCCTGCAACTACGTGAAGCCTTTGATATGCCTGAGGCTAGTTTGAATGATATTTACTTGGCTCTGACCAAAGAG
GAGGATCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UNS3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

71.784

99.177

0.712
  pptA Streptococcus thermophilus LMD-9

70.954

99.177

0.704

Multiple sequence alignment