Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   EQH19_RS05735 Genome accession   NZ_CP035261
Coordinates   1153192..1154001 (-) Length   269 a.a.
NCBI ID   WP_001289493.1    Uniprot ID   Q9RCS5
Organism   Streptococcus pneumoniae strain TVO_1901924     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1148192..1159001
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH19_RS05715 (EQH19_06080) - 1150549..1151535 (+) 987 WP_000204727.1 L-lactate dehydrogenase -
  EQH19_RS05720 (EQH19_06085) - 1151783..1152556 (-) 774 WP_000731139.1 potassium channel family protein -
  EQH19_RS05725 (EQH19_06090) - 1152603..1152857 (-) 255 WP_001809704.1 type II toxin-antitoxin system RelE/ParE family toxin -
  EQH19_RS05730 (EQH19_06095) relB 1152859..1153101 (-) 243 WP_000208080.1 type II toxin-antitoxin system RelB family antitoxin -
  EQH19_RS05735 (EQH19_06100) vicX 1153192..1154001 (-) 810 WP_001289493.1 MBL fold metallo-hydrolase Regulator
  EQH19_RS05740 (EQH19_06105) micB 1154003..1155352 (-) 1350 WP_001861620.1 cell wall metabolism sensor histidine kinase VicK Regulator
  EQH19_RS05745 (EQH19_06110) micA 1155345..1156049 (-) 705 WP_000722076.1 response regulator YycF Regulator
  EQH19_RS05750 (EQH19_06115) mutY 1156104..1157279 (-) 1176 WP_000886153.1 A/G-specific adenine glycosylase -
  EQH19_RS10775 - 1157376..1157501 (+) 126 WP_001818232.1 hypothetical protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29916.89 Da        Isoelectric Point: 6.1743

>NTDB_id=338381 EQH19_RS05735 WP_001289493.1 1153192..1154001(-) (vicX) [Streptococcus pneumoniae strain TVO_1901924]
MSEIGFKYSILASGSSGNSFYLETSKKKLLVDAGLSGKKITSLLAEINRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRFMKDDKSFVLLTDTGYVSDRMAG
IVENADGYLIEANHDVEILRSGSYAWRLKQRILSDLGHLSNEDGAEAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFKVYDTSPDTATPLTEI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=338381 EQH19_RS05735 WP_001289493.1 1153192..1154001(-) (vicX) [Streptococcus pneumoniae strain TVO_1901924]
ATGAGTGAAATAGGCTTTAAATACAGTATTTTAGCGTCGGGTTCCAGTGGAAATTCTTTTTATCTGGAAACCTCAAAAAA
GAAGCTTTTAGTGGATGCAGGCTTGTCTGGCAAGAAAATTACCAGTCTGCTAGCTGAAATTAACCGCAAGCCAGAAGACC
TGGATGCCATCTTGATTACCCATGAGCATTCAGATCATATCCATGGAGTAGGCGTTTTGGCTCGCAAGTATGGTATGGAT
CTTTATGCCAATGAAAAGACCTGGCAAGCTATGGAAAATAGTAAATATCTTGGCAAGGTGGATTCTTCGCAAAAGCATAT
TTTTGAAATGGGTAAAACCAAAACTTTTGGAGATATCGACATCGAGAGTTTTGGTGTAAGCCATGATGCAGTCGCACCGC
AGTTCTATCGCTTTATGAAGGATGACAAGAGTTTTGTCCTTTTGACAGATACAGGTTATGTCAGTGACCGTATGGCGGGC
ATTGTCGAAAATGCGGATGGCTATCTTATCGAGGCCAACCATGATGTAGAAATTTTGCGATCAGGTTCTTACGCTTGGCG
ACTCAAACAACGAATCCTATCTGACCTTGGTCACCTTTCTAACGAGGACGGTGCTGAAGCTATGATTCGGACGCTAGGAA
ATCGTACTAAGAAGATTTACCTTGGGCATTTATCTAAGGAAAATAATATCAAGGAACTGGCTCATATGACCATGGTCAAT
CAGCTGGCTCAAGCTGATCTGGGAGTCGGAGTAGACTTTAAGGTTTATGATACCTCACCAGATACCGCAACACCATTGAC
AGAGATATAG

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.323

100

0.773

Multiple sequence alignment