Detailed information
Bioinformatically predicted
Overview
| Name | letA | Type | Regulator |
| Locus tag | F0316_RS08060 | Genome accession | NZ_CP043554 |
| Coordinates | 1736629..1737273 (-) | Length | 214 a.a. |
| NCBI ID | WP_001902713.1 | Uniprot ID | A0A067B7V8 |
| Organism | Vibrio cholerae strain RFB16 | ||
| Function | regulate competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1731629..1742273
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F0316_RS08020 (F0316_08020) | - | 1731699..1732184 (+) | 486 | WP_001261945.1 | GNAT family N-acetyltransferase | - |
| F0316_RS08025 (F0316_08025) | - | 1732181..1733299 (-) | 1119 | WP_001190448.1 | GGDEF domain-containing protein | - |
| F0316_RS08050 (F0316_08050) | pgsA | 1734192..1734749 (-) | 558 | WP_001211977.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| F0316_RS08055 (F0316_08055) | uvrC | 1734797..1736629 (-) | 1833 | WP_001884660.1 | excinuclease ABC subunit UvrC | - |
| F0316_RS08060 (F0316_08060) | letA | 1736629..1737273 (-) | 645 | WP_001902713.1 | UvrY/SirA/GacA family response regulator transcription factor | Regulator |
| F0316_RS08065 (F0316_08065) | - | 1737649..1740012 (+) | 2364 | WP_149560388.1 | DNA polymerase II | - |
| F0316_RS08070 (F0316_08070) | - | 1739984..1742083 (-) | 2100 | WP_172625994.1 | PTS sugar transporter subunit IIC/EAL domain-containing protein | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 23721.47 Da Isoelectric Point: 6.4970
>NTDB_id=338378 F0316_RS08060 WP_001902713.1 1736629..1737273(-) (letA) [Vibrio cholerae strain RFB16]
MISVFLVDDHELVRTGIRRIIEDVRGMKVAGEADSGEEAVKWCRANHADVILMDMNMPGIGGLEATKKLLRVNPDIKIIV
LTVHTENPFPTKVMQAGAAGYLTKGAAPDEMVNAIRIVHSGQRYISPEIAQQMALSQFSPASENPFADLSERELQIMLMI
TKGQKVTDISEQLSLSPKTVNSYRYRLFAKLNINGDVELTHLAIRHGILDTEKL
MISVFLVDDHELVRTGIRRIIEDVRGMKVAGEADSGEEAVKWCRANHADVILMDMNMPGIGGLEATKKLLRVNPDIKIIV
LTVHTENPFPTKVMQAGAAGYLTKGAAPDEMVNAIRIVHSGQRYISPEIAQQMALSQFSPASENPFADLSERELQIMLMI
TKGQKVTDISEQLSLSPKTVNSYRYRLFAKLNINGDVELTHLAIRHGILDTEKL
Nucleotide
Download Length: 645 bp
>NTDB_id=338378 F0316_RS08060 WP_001902713.1 1736629..1737273(-) (letA) [Vibrio cholerae strain RFB16]
TTGATTAGTGTTTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAAT
GAAAGTAGCAGGGGAAGCTGACAGCGGTGAAGAAGCAGTAAAATGGTGTCGTGCGAACCATGCCGACGTCATTTTAATGG
ATATGAACATGCCGGGTATTGGTGGCTTGGAAGCAACCAAGAAGCTGTTGCGTGTTAATCCGGACATTAAAATTATCGTA
TTGACGGTACATACCGAAAATCCGTTCCCAACCAAAGTGATGCAAGCGGGTGCCGCAGGTTATCTCACGAAGGGCGCGGC
ACCGGATGAAATGGTCAATGCGATCCGTATCGTTCACAGCGGTCAGCGTTACATTTCTCCAGAAATTGCGCAGCAAATGG
CGTTGAGTCAGTTTTCGCCCGCCTCTGAAAATCCTTTTGCTGATCTCTCCGAACGTGAATTGCAGATCATGTTAATGATC
ACCAAAGGCCAGAAGGTGACGGACATTTCCGAACAGCTCAGTTTGAGCCCGAAAACCGTCAACAGTTACCGCTACCGTTT
GTTCGCCAAGCTGAATATCAACGGTGATGTGGAATTAACCCACTTAGCTATCCGACACGGGATCTTAGATACTGAGAAGT
TATAG
TTGATTAGTGTTTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAAT
GAAAGTAGCAGGGGAAGCTGACAGCGGTGAAGAAGCAGTAAAATGGTGTCGTGCGAACCATGCCGACGTCATTTTAATGG
ATATGAACATGCCGGGTATTGGTGGCTTGGAAGCAACCAAGAAGCTGTTGCGTGTTAATCCGGACATTAAAATTATCGTA
TTGACGGTACATACCGAAAATCCGTTCCCAACCAAAGTGATGCAAGCGGGTGCCGCAGGTTATCTCACGAAGGGCGCGGC
ACCGGATGAAATGGTCAATGCGATCCGTATCGTTCACAGCGGTCAGCGTTACATTTCTCCAGAAATTGCGCAGCAAATGG
CGTTGAGTCAGTTTTCGCCCGCCTCTGAAAATCCTTTTGCTGATCTCTCCGAACGTGAATTGCAGATCATGTTAATGATC
ACCAAAGGCCAGAAGGTGACGGACATTTCCGAACAGCTCAGTTTGAGCCCGAAAACCGTCAACAGTTACCGCTACCGTTT
GTTCGCCAAGCTGAATATCAACGGTGATGTGGAATTAACCCACTTAGCTATCCGACACGGGATCTTAGATACTGAGAAGT
TATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| letA | Legionella pneumophila str. Paris |
51.429 |
98.131 |
0.505 |
| letA | Legionella pneumophila strain ERS1305867 |
51.429 |
98.131 |
0.505 |