Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   EQH21_RS09000 Genome accession   NZ_CP035259
Coordinates   1773387..1774007 (-) Length   206 a.a.
NCBI ID   WP_000839908.1    Uniprot ID   A0A0B7M636
Organism   Streptococcus pneumoniae strain TVO_1901926     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1768387..1779007
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH21_RS08975 (EQH21_09425) recA 1768764..1769930 (-) 1167 WP_054362818.1 recombinase RecA Machinery gene
  EQH21_RS08980 (EQH21_09430) cinA 1769985..1771241 (-) 1257 WP_000642706.1 competence/damage-inducible protein A Machinery gene
  EQH21_RS08985 (EQH21_09435) brpA 1771326..1772342 (-) 1017 WP_000239278.1 biofilm formation/cell division transcriptional regulator BrpA -
  EQH21_RS08990 (EQH21_09440) - 1772350..1772868 (-) 519 WP_000455537.1 GNAT family N-acetyltransferase -
  EQH21_RS08995 (EQH21_09445) tsaE 1772858..1773301 (-) 444 WP_000288232.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  EQH21_RS09000 (EQH21_09450) comM 1773387..1774007 (-) 621 WP_000839908.1 hypothetical protein Regulator
  EQH21_RS09005 (EQH21_09460) - 1774390..1775253 (-) 864 WP_000105295.1 helix-turn-helix domain-containing protein -
  EQH21_RS10670 (EQH21_09465) - 1775442..1775612 (+) 171 WP_054362819.1 PhrA family quorum-sensing system peptide -
  EQH21_RS09010 (EQH21_09470) - 1776062..1778077 (+) 2016 WP_000732376.1 DUF1430 domain-containing protein -
  EQH21_RS09015 (EQH21_09475) - 1778079..1778711 (+) 633 WP_000571415.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23552.72 Da        Isoelectric Point: 10.1254

>NTDB_id=338251 EQH21_RS09000 WP_000839908.1 1773387..1774007(-) (comM) [Streptococcus pneumoniae strain TVO_1901926]
MKSMRILFLLALIQISLSSCFLWKECILSFKQSTAFFIGSMVFVSGICAGVNYLYTRKQEVHSVLASKKSVKLFYSMLLL
INLLGAVLVLSDNLFIKNTLQQELVDFLLPSFFFLFGLDLLIFLPLKKYVRDFLAMLDRKKTVLVTILATLLFLRNPMTI
VSLLIYIGLGLFFAAYLVPNSVKKEVSFYGHIFRDLVLVIVTLIFF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=338251 EQH21_RS09000 WP_000839908.1 1773387..1774007(-) (comM) [Streptococcus pneumoniae strain TVO_1901926]
ATGAAATCAATGAGAATCTTATTTTTGTTAGCTTTAATTCAAATCAGTTTGAGTAGCTGTTTCTTATGGAAGGAATGCAT
CTTGTCCTTTAAACAAAGTACAGCTTTTTTCATCGGAAGCATGGTTTTCGTTTCAGGAATCTGTGCTGGAGTAAATTATC
TTTATACTCGTAAGCAAGAAGTCCATAGTGTCCTAGCCAGTAAGAAGTCGGTGAAGCTTTTTTACAGTATGTTACTCTTA
ATTAATTTGTTAGGAGCTGTTCTTGTTTTGTCAGATAACTTGTTCATCAAAAATACGCTGCAGCAAGAATTAGTTGACTT
TTTATTGCCATCCTTCTTTTTCCTATTTGGGCTAGATTTGCTGATTTTTTTACCCTTGAAAAAATACGTGCGCGATTTTC
TTGCTATGCTGGACAGAAAAAAGACAGTGTTGGTGACTATTTTAGCAACACTTCTTTTCTTAAGAAATCCAATGACCATT
GTCTCACTTCTGATTTATATTGGACTGGGCTTGTTTTTTGCAGCCTATCTTGTCCCAAATTCGGTTAAGAAGGAAGTTTC
CTTTTATGGTCATATTTTCCGAGATCTTGTATTGGTCATTGTTACGCTCATTTTCTTTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0B7M636

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

100

100

1
  comM Streptococcus pneumoniae R6

100

100

1
  comM Streptococcus pneumoniae TIGR4

100

100

1
  comM Streptococcus mitis NCTC 12261

38.974

94.66

0.369
  comM Streptococcus mitis SK321

38.974

94.66

0.369

Multiple sequence alignment