Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   EQH26_RS08790 Genome accession   NZ_CP035254
Coordinates   1746660..1747370 (+) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A062WVH4
Organism   Streptococcus pneumoniae strain TVO_1901932     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1741660..1752370
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH26_RS08775 (EQH26_09275) - 1742201..1742449 (-) 249 WP_000364990.1 YneF family protein -
  EQH26_RS08780 (EQH26_09280) treC 1742705..1744330 (-) 1626 WP_238126563.1 alpha,alpha-phosphotrehalase -
  EQH26_RS08785 (EQH26_09290) treP 1744508..1746475 (-) 1968 WP_054378368.1 PTS system trehalose-specific EIIBC component -
  EQH26_RS08790 (EQH26_09295) treR 1746660..1747370 (+) 711 WP_000760673.1 trehalose operon repressor Regulator
  EQH26_RS08795 (EQH26_09300) - 1747403..1748197 (-) 795 WP_054369635.1 ABC transporter ATP-binding protein -
  EQH26_RS08800 (EQH26_09305) - 1748210..1749104 (-) 895 Protein_1765 ABC transporter permease -
  EQH26_RS08805 (EQH26_09310) - 1749116..1749925 (-) 810 WP_001821834.1 ABC transporter substrate-binding protein -
  EQH26_RS10870 - 1750347..1750478 (-) 132 WP_000787593.1 hypothetical protein -
  EQH26_RS08810 (EQH26_09315) amiF 1750544..1751470 (-) 927 WP_001291293.1 ATP-binding cassette domain-containing protein Regulator

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=337924 EQH26_RS08790 WP_000760673.1 1746660..1747370(+) (treR) [Streptococcus pneumoniae strain TVO_1901932]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=337924 EQH26_RS08790 WP_000760673.1 1746660..1747370(+) (treR) [Streptococcus pneumoniae strain TVO_1901932]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTCCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACAGACTATCTGGATATGGAACTAATTCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGACGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAGAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A062WVH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593

Multiple sequence alignment