Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   EQH28_RS09580 Genome accession   NZ_CP035252
Coordinates   1862942..1863562 (-) Length   206 a.a.
NCBI ID   WP_000839908.1    Uniprot ID   A0A0B7M636
Organism   Streptococcus pneumoniae strain TVO_1901934     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1857942..1868562
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH28_RS09555 (EQH28_10095) recA 1858320..1859486 (-) 1167 WP_001085463.1 recombinase RecA Machinery gene
  EQH28_RS09560 (EQH28_10100) cinA 1859541..1860797 (-) 1257 WP_000642717.1 competence/damage-inducible protein A Machinery gene
  EQH28_RS09565 (EQH28_10105) brpA 1860881..1861897 (-) 1017 WP_000239278.1 biofilm formation/cell division transcriptional regulator BrpA -
  EQH28_RS09570 (EQH28_10110) - 1861905..1862423 (-) 519 WP_000455539.1 GNAT family N-acetyltransferase -
  EQH28_RS09575 (EQH28_10115) tsaE 1862413..1862856 (-) 444 WP_000288236.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  EQH28_RS09580 (EQH28_10120) comM 1862942..1863562 (-) 621 WP_000839908.1 hypothetical protein Regulator
  EQH28_RS09585 (EQH28_10130) - 1863945..1864808 (-) 864 WP_000105295.1 helix-turn-helix domain-containing protein -
  EQH28_RS09590 (EQH28_10135) - 1865154..1867169 (+) 2016 WP_047474860.1 DUF1430 domain-containing protein -
  EQH28_RS09595 (EQH28_10140) - 1867171..1867803 (+) 633 WP_000571415.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23552.72 Da        Isoelectric Point: 10.1254

>NTDB_id=337856 EQH28_RS09580 WP_000839908.1 1862942..1863562(-) (comM) [Streptococcus pneumoniae strain TVO_1901934]
MKSMRILFLLALIQISLSSCFLWKECILSFKQSTAFFIGSMVFVSGICAGVNYLYTRKQEVHSVLASKKSVKLFYSMLLL
INLLGAVLVLSDNLFIKNTLQQELVDFLLPSFFFLFGLDLLIFLPLKKYVRDFLAMLDRKKTVLVTILATLLFLRNPMTI
VSLLIYIGLGLFFAAYLVPNSVKKEVSFYGHIFRDLVLVIVTLIFF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=337856 EQH28_RS09580 WP_000839908.1 1862942..1863562(-) (comM) [Streptococcus pneumoniae strain TVO_1901934]
ATGAAATCAATGAGAATCTTATTTTTGTTAGCTTTAATTCAAATCAGTTTGAGTAGCTGTTTCTTATGGAAGGAATGCAT
CTTGTCCTTTAAACAAAGTACAGCTTTTTTCATCGGAAGCATGGTTTTCGTTTCAGGAATCTGTGCTGGAGTAAATTATC
TTTATACCCGTAAGCAAGAAGTCCATAGTGTCCTAGCCAGTAAGAAGTCGGTGAAGCTTTTTTACAGTATGTTACTCTTA
ATTAATTTGTTAGGAGCTGTTCTTGTTTTGTCAGATAACTTGTTCATCAAAAATACGCTGCAGCAAGAATTAGTTGACTT
TTTATTGCCATCCTTCTTTTTCCTATTTGGGCTAGATTTGCTGATTTTTTTACCCTTGAAAAAATACGTGCGCGATTTTC
TTGCTATGCTAGACAGAAAAAAGACAGTGTTGGTGACTATTTTAGCAACACTTCTTTTCTTAAGAAATCCAATGACCATT
GTCTCACTTCTGATTTATATTGGACTGGGCTTGTTTTTTGCAGCCTATCTTGTCCCAAATTCGGTTAAGAAGGAAGTTTC
CTTTTATGGTCATATTTTCCGAGATCTTGTATTGGTCATTGTTACGCTCATTTTCTTTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0B7M636

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

100

100

1
  comM Streptococcus pneumoniae R6

100

100

1
  comM Streptococcus pneumoniae TIGR4

100

100

1
  comM Streptococcus mitis NCTC 12261

38.974

94.66

0.369
  comM Streptococcus mitis SK321

38.974

94.66

0.369

Multiple sequence alignment