Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   EQH29_RS10565 Genome accession   NZ_CP035251
Coordinates   2097506..2098264 (+) Length   252 a.a.
NCBI ID   WP_000410378.1    Uniprot ID   A0A064C0A8
Organism   Streptococcus pneumoniae strain TVO_1901935     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2092506..2103264
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH29_RS10535 (EQH29_11160) comE 2093102..2093854 (-) 753 WP_000866058.1 competence system response regulator transcription factor ComE Regulator
  EQH29_RS10540 (EQH29_11165) comD/comD1 2093851..2095176 (-) 1326 WP_001813347.1 competence system sensor histidine kinase ComD Regulator
  EQH29_RS10545 (EQH29_11170) comC/comC1 2095197..2095322 (-) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  EQH29_RS10555 (EQH29_11180) rlmH 2095605..2096084 (-) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  EQH29_RS10560 (EQH29_11185) htrA 2096267..2097448 (+) 1182 WP_000681601.1 S1C family serine protease Regulator
  EQH29_RS10565 (EQH29_11190) spo0J 2097506..2098264 (+) 759 WP_000410378.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 252 a.a.        Molecular weight: 29153.50 Da        Isoelectric Point: 9.0667

>NTDB_id=337800 EQH29_RS10565 WP_000410378.1 2097506..2098264(+) (spo0J) [Streptococcus pneumoniae strain TVO_1901935]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=337800 EQH29_RS10565 WP_000410378.1 2097506..2098264(+) (spo0J) [Streptococcus pneumoniae strain TVO_1901935]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTCTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
GTTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A064C0A8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508


Multiple sequence alignment