Detailed information NTG0033769

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: AVIN_RS06735
• Genome accession: NC_012560
• Coordinates: 1454808..1457018 (+)
• Length: 736 a.a.
• NCBI ID: WP_156483617.1
• Uniprot ID: -
• Organism: Azotobacter vinelandii DJ
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1449808..1462018

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AVIN_RS06710 (Avin_14680)	-	1449962..1450684 (-)	723	WP_012700103.1	glycerophosphodiester phosphodiesterase	-
AVIN_RS06715 (Avin_14690)	-	1450932..1452182 (+)	1251	WP_012700104.1	lipoprotein-releasing ABC transporter permease subunit	-
AVIN_RS06720 (Avin_14700)	lolD	1452175..1452873 (+)	699	WP_012700105.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
AVIN_RS06725 (Avin_14710)	-	1452876..1454120 (+)	1245	WP_012700106.1	lipoprotein-releasing ABC transporter permease subunit	-
AVIN_RS06730 (Avin_14720)	-	1454145..1454672 (-)	528	WP_012700107.1	DUF2062 domain-containing protein	-
AVIN_RS06735 (Avin_14730)	comA	1454808..1457018 (+)	2211	WP_156483617.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AVIN_RS06740 (Avin_14740)	-	1457090..1457722 (+)	633	WP_041807047.1	MotA/TolQ/ExbB proton channel family protein	-
AVIN_RS06745 (Avin_14750)	-	1457719..1458147 (+)	429	WP_012700110.1	biopolymer transporter ExbD	-
AVIN_RS06750 (Avin_14760)	lpxK	1458147..1459148 (+)	1002	WP_012700111.1	tetraacyldisaccharide 4'-kinase	-
AVIN_RS06755 (Avin_14770)	-	1459209..1459394 (+)	186	WP_012700112.1	Trm112 family protein	-
AVIN_RS06760 (Avin_14780)	kdsB	1459391..1460155 (+)	765	WP_012700113.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
AVIN_RS06765 (Avin_14790)	-	1460155..1460619 (+)	465	WP_012700114.1	low molecular weight protein-tyrosine-phosphatase	-
AVIN_RS06770 (Avin_14800)	murB	1460616..1461635 (+)	1020	WP_012700115.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 79919.77 Da
• Isoelectric Point: 10.2397

>NTDB_id=33769 AVIN_RS06735 WP_156483617.1 1454808..1457018(+) (comA) [Azotobacter vinelandii DJ]
MLALTAGLLVLRFLPALPPWWLWSPMALGAAILLAARRYSPALFLFGLGWACLSAHWALEERLPVELDGRTLWLEGLVVG
LPARIDGTLHFQLEEASSRRAELPGRLRLAWHAGPEVRAGERWRLAVSLKRPRGLVNPQGFDYEAWLLAQRIGATGTVKA
GERLGTPENADGWRDSLRQRLLQVDAHGREGALAALVMGDASGLSVADWKLLQDTGTVHLMVISGQHVGLLAGLVYGLVV
LLARFGLWPGFLPWLPCACGLAFATALGYGWLAGFGVPVQRACAMLAVVLFWRLRFRHLGLWLPILLALDGVLLLEPLAS
LQPGFWLSFGAVVILVLAFGGRLGAWSWRQTLWRAQWTSALGLLPLLLALGLPISLSGPLANLVAVPWVGFAVVPLALLG
TLLLPLPAMGEGLLWLAGALLETLFRLLGEIAGAVPAWLPHAVPVWGWLLALLGTLLILLPAGVPLRVPGLALLLPLAFP
PQERIPQARADVWLLDVGQGLAVLVRTRGHDLLYDAGPRFGDFDLGERVVLPSLRNLGVGRLDRLLLSHADGDHAGGALA
VRRALPVGEVVAGEAQAQSAALAAQPCARRAWQWDGVRFATWHWTAVQEGNRASCVLLVEAAGERLLLTGDIDAAAERAL
LDSHPEWRADWLLAPHHGSRSSSSPALLKALAPRAVLISRGWNNGFGHPHAQVVERYRKLPAVIHDTARQGALRFRLGDW
GRARGLREEPRFWREK

Nucleotide

• Length: 2211 bp

>NTDB_id=33769 AVIN_RS06735 WP_156483617.1 1454808..1457018(+) (comA) [Azotobacter vinelandii DJ]
ATGTTGGCGCTCACCGCAGGTCTGCTCGTCCTGCGTTTCCTTCCGGCCCTACCGCCCTGGTGGCTGTGGTCGCCGATGGC
GCTGGGCGCTGCGATCCTTCTGGCGGCGCGTCGCTATTCGCCGGCGCTCTTTCTCTTCGGTCTCGGCTGGGCCTGCCTGT
CGGCGCACTGGGCGCTGGAGGAACGGTTGCCTGTCGAACTCGATGGTCGCACCCTGTGGCTGGAGGGGCTGGTGGTCGGT
CTGCCGGCGCGCATCGACGGCACGCTGCATTTCCAACTGGAGGAGGCCTCTTCCCGGCGCGCCGAACTGCCCGGGCGACT
GCGCCTAGCGTGGCACGCCGGGCCGGAGGTCCGCGCCGGGGAGCGCTGGCGCCTGGCGGTCAGCCTCAAGCGTCCGCGCG
GCCTGGTCAACCCGCAGGGTTTCGATTACGAGGCCTGGCTGCTGGCCCAGCGGATCGGCGCCACCGGGACGGTGAAAGCG
GGAGAGCGACTCGGAACGCCGGAAAACGCCGACGGTTGGCGCGATTCCCTGCGCCAGCGCCTGCTGCAGGTCGATGCCCA
TGGCCGTGAGGGCGCGCTCGCCGCGCTGGTGATGGGCGACGCGTCCGGGCTGAGCGTGGCGGACTGGAAGCTCCTGCAGG
ATACCGGCACCGTGCATCTGATGGTGATCTCCGGCCAGCATGTCGGCCTGCTTGCCGGCCTGGTCTACGGGCTGGTGGTC
CTGCTGGCGAGATTTGGCCTGTGGCCGGGTTTTCTGCCCTGGTTGCCCTGTGCCTGCGGCCTGGCCTTCGCCACCGCGCT
CGGTTATGGCTGGCTGGCCGGCTTCGGGGTACCAGTACAGCGGGCCTGCGCCATGCTCGCCGTGGTGCTGTTCTGGCGCC
TGCGTTTCCGCCACCTGGGTCTCTGGCTACCCATCCTGCTGGCGCTGGACGGCGTACTGCTGCTCGAGCCCCTGGCCAGC
CTGCAGCCGGGGTTCTGGCTGTCGTTCGGTGCGGTGGTGATCCTCGTCCTGGCCTTCGGCGGCCGGCTGGGTGCCTGGTC
GTGGCGGCAGACCCTGTGGCGAGCGCAGTGGACCAGTGCGCTGGGACTGCTACCGTTGTTGCTGGCCTTGGGCCTGCCGA
TCAGTCTCAGCGGTCCGTTGGCCAATCTGGTCGCGGTACCCTGGGTCGGTTTCGCGGTGGTCCCGCTGGCTCTGCTCGGA
ACCCTGCTGCTGCCCTTGCCGGCAATGGGCGAGGGCCTTCTCTGGCTGGCCGGCGCCTTGCTGGAGACGCTGTTTCGGCT
GCTCGGCGAGATCGCCGGCGCCGTACCGGCCTGGCTGCCCCACGCGGTGCCGGTCTGGGGCTGGCTGCTGGCGCTGCTCG
GGACCCTGCTGATCCTGCTGCCGGCGGGAGTGCCGCTGCGTGTCCCGGGACTGGCGCTGCTGCTGCCCCTGGCATTTCCG
CCGCAGGAGCGAATCCCGCAGGCACGGGCCGATGTCTGGCTGCTGGATGTCGGGCAGGGCCTTGCCGTGCTTGTGCGTAC
CCGCGGGCACGACCTGCTCTATGATGCTGGGCCGCGTTTCGGCGATTTCGATCTGGGCGAGCGCGTGGTCCTGCCTTCGC
TGCGCAATCTCGGCGTGGGCCGCCTGGATCGCCTGCTGCTCAGCCATGCCGATGGCGACCACGCCGGTGGCGCCCTGGCC
GTGCGGCGCGCTCTGCCGGTGGGCGAGGTCGTCGCCGGCGAGGCGCAGGCGCAATCGGCGGCGCTCGCCGCGCAGCCTTG
CGCCCGTCGCGCCTGGCAGTGGGATGGTGTGCGTTTCGCCACCTGGCACTGGACGGCCGTGCAAGAGGGCAATCGGGCTT
CCTGCGTGCTGCTGGTCGAGGCCGCCGGCGAGCGCCTGCTGCTGACCGGCGATATCGATGCCGCAGCCGAGCGGGCACTG
CTCGACAGCCACCCGGAGTGGCGCGCCGACTGGCTGCTGGCGCCTCACCACGGCAGCCGCAGTTCGTCTTCGCCGGCTCT
GCTCAAGGCCCTGGCGCCGCGCGCGGTGCTGATCTCGCGCGGCTGGAACAACGGCTTCGGCCATCCCCATGCGCAGGTCG
TGGAGCGTTACCGGAAGCTGCCGGCCGTGATTCACGATACTGCGCGCCAGGGGGCCCTGCGGTTTCGCCTGGGCGACTGG
GGCCGGGCGCGCGGGCTGCGCGAAGAGCCCCGCTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (196-461)

• Domain of unknown function (DUF4131) (DUF4131) (18-163)

• Metallo-beta-lactamase superfamily (Lactamase_B) (496-678)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	65.912	96.06	0.633
comA	Ralstonia pseudosolanacearum GMI1000	34.814	100	0.394