Detailed information NTG0337472

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: EQH34_RS09325
• Genome accession: NZ_CP035246
• Coordinates: 1836845..1837249 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588013.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901941
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1831845..1842249

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH34_RS09290 (EQH34_09840)	rnpA	1832259..1832630 (-)	372	WP_000739246.1	ribonuclease P protein component	-
EQH34_RS10445	-	1832647..1832778 (-)	132	WP_000768904.1	hypothetical protein	-
EQH34_RS09295 (EQH34_09845)	-	1832779..1833969 (-)	1191	WP_000167766.1	acetate kinase	-
EQH34_RS09300 (EQH34_09850)	comYH	1834020..1834973 (-)	954	WP_000345101.1	class I SAM-dependent methyltransferase	Machinery gene
EQH34_RS09305 (EQH34_09855)	-	1835034..1835628 (-)	595	Protein_1827	class I SAM-dependent methyltransferase	-
EQH34_RS09310 (EQH34_09860)	comGG/cglG	1835765..1836178 (-)	414	WP_000265624.1	competence type IV pilus minor pilin ComGG	Machinery gene
EQH34_RS09315 (EQH34_09865)	comGF/cglF	1836156..1836617 (-)	462	WP_000250542.1	competence type IV pilus minor pilin ComGF	Machinery gene
EQH34_RS09320 (EQH34_09870)	comGE/cglE	1836580..1836882 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
EQH34_RS09325 (EQH34_09875)	comGD/cglD	1836845..1837249 (-)	405	WP_000588013.1	competence type IV pilus minor pilin ComGD	Machinery gene
EQH34_RS09330 (EQH34_09880)	comGC/cglC	1837242..1837568 (-)	327	WP_000738626.1	comG operon protein ComGC	Machinery gene
EQH34_RS09335 (EQH34_09885)	comGB/cglB	1837570..1838586 (-)	1017	WP_076750272.1	competence type IV pilus assembly protein ComGB	Machinery gene
EQH34_RS09340 (EQH34_09890)	comGA/cglA/cilD	1838534..1839475 (-)	942	WP_000249556.1	competence type IV pilus ATPase ComGA	Machinery gene
EQH34_RS09345 (EQH34_09895)	-	1839551..1839916 (-)	366	WP_000286415.1	DUF1033 family protein	-
EQH34_RS09350 (EQH34_09900)	-	1840067..1841125 (-)	1059	WP_000649466.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14665.85 Da
• Isoelectric Point: 10.2164

>NTDB_id=337472 EQH34_RS09325 WP_000588013.1 1836845..1837249(-) (comGD/cglD) [Streptococcus pneumoniae strain TVO_1901941]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTNLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=337472 EQH34_RS09325 WP_000588013.1 1836845..1837249(-) (comGD/cglD) [Streptococcus pneumoniae strain TVO_1901941]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAATCTAAATTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47