Detailed information
Bioinformatically predicted
Overview
| Name | comGE/cglE | Type | Machinery gene |
| Locus tag | EQH36_RS09665 | Genome accession | NZ_CP035244 |
| Coordinates | 1884017..1884319 (-) | Length | 100 a.a. |
| NCBI ID | WP_000413380.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain TVO_1901945 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1879017..1889319
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQH36_RS09635 (EQH36_10145) | rnpA | 1879697..1880068 (-) | 372 | WP_000739246.1 | ribonuclease P protein component | - |
| EQH36_RS10875 | - | 1880085..1880216 (-) | 132 | WP_000768904.1 | hypothetical protein | - |
| EQH36_RS09640 (EQH36_10150) | - | 1880217..1881407 (-) | 1191 | WP_000167768.1 | acetate kinase | - |
| EQH36_RS09645 (EQH36_10155) | comYH | 1881458..1882411 (-) | 954 | WP_000345086.1 | class I SAM-dependent methyltransferase | Machinery gene |
| EQH36_RS09650 (EQH36_10160) | - | 1882472..1883066 (-) | 595 | Protein_1907 | class I SAM-dependent methyltransferase | - |
| EQH36_RS09655 (EQH36_10165) | comGG/cglG | 1883169..1883615 (-) | 447 | WP_001811371.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| EQH36_RS09660 (EQH36_10170) | comGF/cglF | 1883593..1884054 (-) | 462 | WP_000250523.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| EQH36_RS09665 (EQH36_10175) | comGE/cglE | 1884017..1884319 (-) | 303 | WP_000413380.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| EQH36_RS09670 (EQH36_10180) | comGD/cglD | 1884282..1884686 (-) | 405 | WP_000588023.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| EQH36_RS09675 (EQH36_10185) | comGC/cglC | 1884679..1885005 (-) | 327 | WP_000738621.1 | comG operon protein ComGC | Machinery gene |
| EQH36_RS09680 (EQH36_10190) | comGB/cglB | 1885007..1886023 (-) | 1017 | WP_074017570.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| EQH36_RS09685 (EQH36_10195) | comGA/cglA/cilD | 1885971..1886912 (-) | 942 | WP_000249568.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EQH36_RS09690 (EQH36_10200) | - | 1886988..1887353 (-) | 366 | WP_000286415.1 | DUF1033 family protein | - |
| EQH36_RS09695 (EQH36_10205) | - | 1887504..1888562 (-) | 1059 | WP_000649468.1 | zinc-dependent alcohol dehydrogenase family protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 11135.11 Da Isoelectric Point: 9.7273
>NTDB_id=337315 EQH36_RS09665 WP_000413380.1 1884017..1884319(-) (comGE/cglE) [Streptococcus pneumoniae strain TVO_1901945]
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVNINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVNINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
Nucleotide
Download Length: 303 bp
>NTDB_id=337315 EQH36_RS09665 WP_000413380.1 1884017..1884319(-) (comGE/cglE) [Streptococcus pneumoniae strain TVO_1901945]
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCTTGCAGACAGGTCAAAATCAGGTAAACATAAACGGAGTTGAGATTCAGGTGTTTTCT
AGCGAAAAGGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCTTGCAGACAGGTCAAAATCAGGTAAACATAAACGGAGTTGAGATTCAGGTGTTTTCT
AGCGAAAAGGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE/cglE | Streptococcus mitis NCTC 12261 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus pneumoniae Rx1 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus pneumoniae D39 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus pneumoniae R6 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus pneumoniae TIGR4 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus mitis SK321 |
98 |
100 |
0.98 |
| comYE | Streptococcus mutans UA140 |
43.333 |
90 |
0.39 |
| comYE | Streptococcus mutans UA159 |
43.333 |
90 |
0.39 |