Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | FZN31_RS19935 | Genome accession | NZ_CP043414 |
| Coordinates | 4199270..4199710 (+) | Length | 146 a.a. |
| NCBI ID | WP_000360904.1 | Uniprot ID | P36647 |
| Organism | Escherichia coli strain EC42405 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 4194270..4204710
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FZN31_RS19915 (FZN31_20265) | aroP | 4195268..4196641 (+) | 1374 | WP_000969915.1 | aromatic amino acid transporter AroP | - |
| FZN31_RS19920 (FZN31_20270) | ampE | 4196684..4197538 (-) | 855 | WP_000172005.1 | beta-lactamase regulator AmpE | - |
| FZN31_RS19925 (FZN31_20275) | ampD | 4197535..4198086 (-) | 552 | WP_000923726.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| FZN31_RS19930 (FZN31_20280) | nadC | 4198174..4199067 (+) | 894 | WP_032183211.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| FZN31_RS19935 (FZN31_20285) | pilA | 4199270..4199710 (+) | 441 | WP_000360904.1 | prepilin peptidase-dependent pilin | Machinery gene |
| FZN31_RS19940 (FZN31_20290) | pilB | 4199720..4201117 (+) | 1398 | WP_105288066.1 | type II secretion system protein GspE | Machinery gene |
| FZN31_RS19945 (FZN31_20295) | hofC | 4201107..4202309 (+) | 1203 | WP_000157286.1 | protein transport protein HofC | - |
| FZN31_RS19950 (FZN31_20300) | guaC | 4202344..4203387 (-) | 1044 | WP_161399928.1 | GMP reductase | - |
| FZN31_RS24920 | - | 4203543..4203587 (-) | 45 | WP_120795372.1 | protein YacM | - |
| FZN31_RS19955 (FZN31_20305) | coaE | 4203612..4204232 (+) | 621 | WP_001269512.1 | dephospho-CoA kinase | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15621.75 Da Isoelectric Point: 4.3938
>NTDB_id=337039 FZN31_RS19935 WP_000360904.1 4199270..4199710(+) (pilA) [Escherichia coli strain EC42405]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=337039 FZN31_RS19935 WP_000360904.1 4199270..4199710(+) (pilA) [Escherichia coli strain EC42405]
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTTAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTTCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTTAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTTCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
43.089 |
84.247 |
0.363 |