Detailed information NTG0033665

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: SGGBAA2069_RS11670
• Genome accession: NC_015215
• Coordinates: 2341912..2343006 (+)
• Length: 364 a.a.
• NCBI ID: WP_009855213.1
• Uniprot ID: -
• Organism: Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2336912..2348006

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SGGBAA2069_RS11645 (SGGBAA2069_c22940)	pgsA	2337337..2337891 (-)	555	WP_009855208.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
SGGBAA2069_RS11650 (SGGBAA2069_c22950)	-	2337901..2338845 (-)	945	WP_009855209.1	helix-turn-helix domain-containing protein	-
SGGBAA2069_RS11655 (SGGBAA2069_c22960)	yfmH	2338909..2340198 (-)	1290	WP_009855210.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
SGGBAA2069_RS11660 (SGGBAA2069_c22970)	yfmF	2340199..2341443 (-)	1245	WP_013643601.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
SGGBAA2069_RS11665 (SGGBAA2069_c22980)	yaaA	2341532..2341909 (+)	378	WP_012962646.1	S4 domain-containing protein YaaA	-
SGGBAA2069_RS11670 (SGGBAA2069_c22990)	recF	2341912..2343006 (+)	1095	WP_009855213.1	DNA replication/repair protein RecF	Machinery gene
SGGBAA2069_RS11675 (SGGBAA2069_c23000)	-	2343069..2343935 (-)	867	WP_009855214.1	GRP family sugar transporter	-
SGGBAA2069_RS11680 (SGGBAA2069_c23010)	guaB	2344175..2345656 (-)	1482	WP_009855215.1	IMP dehydrogenase	-
SGGBAA2069_RS11685 (SGGBAA2069_c23020)	trpS	2345917..2346939 (-)	1023	WP_009855216.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 41763.80 Da
• Isoelectric Point: 6.9437

>NTDB_id=33665 SGGBAA2069_RS11670 WP_009855213.1 2341912..2343006(+) (recF) [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
MWIQKITLKNYRNYLTSELEFSPGLNVFIGKNAQGKTNFLEAIYFLSLTRSHRTRTDKELIHFDAKELLVSGILQRSSGT
VPLDISLSSKGRVTKVNHLKQAKLSDYIGVMTVVLFAPEDLQLIKGAPSLRRKFIDIDLGQIKPIYLADLSNYNHVLKQR
NTYLKTAEKVDTDFLAVLDEQLADFGSRVMEHRLDFISNLEKEADRYHYAISNGVEHLSIHYLSSVSFQEKDDIKPNFLK
ALQKNHQRDIFKKNTSVGPHRDDLEFFINDMPANFGSQGQHRSLILSLKMAEIELIKTVTGDYPILLLDDVMSELDNYRQ
TELLKMIIDKNVQTFITTTSLDHLSQLPDELKIFTVNQGNIQEN

Nucleotide

• Length: 1095 bp

>NTDB_id=33665 SGGBAA2069_RS11670 WP_009855213.1 2341912..2343006(+) (recF) [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
ATGTGGATTCAAAAAATAACGTTAAAAAATTATCGTAACTATCTGACTAGTGAGCTTGAATTTTCTCCTGGACTTAATGT
TTTCATCGGAAAAAACGCTCAAGGAAAGACAAATTTCTTAGAAGCAATTTATTTCCTTTCTCTTACCCGCAGCCACCGCA
CACGAACAGACAAAGAGTTGATTCATTTTGATGCCAAAGAACTTCTGGTTTCTGGTATTTTACAACGTTCAAGTGGTACT
GTTCCTTTAGATATTAGTCTTTCAAGTAAGGGACGTGTTACAAAAGTTAATCATCTAAAACAAGCTAAGTTATCAGACTA
TATTGGTGTAATGACCGTTGTTCTTTTTGCACCTGAAGATTTACAACTCATCAAAGGCGCTCCAAGCCTTCGTCGAAAAT
TTATTGACATTGATTTAGGGCAAATAAAGCCGATTTATTTAGCTGATTTGTCTAATTATAACCACGTGCTAAAACAGCGT
AATACTTATCTTAAAACGGCTGAAAAAGTTGATACTGATTTTTTAGCTGTGCTTGATGAGCAATTAGCTGATTTTGGTAG
CCGTGTCATGGAACATCGTTTAGATTTCATTTCTAATTTAGAAAAAGAAGCCGACCGCTATCATTATGCCATTTCAAACG
GCGTTGAACATCTTAGTATCCATTATCTGTCATCTGTTTCCTTCCAAGAAAAGGATGACATTAAGCCAAATTTCTTAAAA
GCTTTACAAAAAAATCATCAGCGTGATATTTTCAAAAAGAATACAAGTGTTGGTCCCCACCGTGATGATTTAGAATTTTT
CATCAATGATATGCCAGCAAATTTTGGCAGCCAAGGTCAGCACCGTAGCCTAATCTTATCACTAAAAATGGCTGAAATTG
AGTTAATAAAAACAGTAACTGGTGATTATCCTATTTTACTTTTAGATGATGTCATGAGCGAGCTTGATAATTACAGACAA
ACCGAACTCTTAAAAATGATTATTGATAAAAACGTTCAAACCTTCATTACAACAACAAGCCTCGACCACCTATCACAGCT
TCCGGACGAGTTAAAAATCTTTACAGTTAATCAAGGTAACATTCAAGAAAATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	64.835	100	0.648
recF	Bacillus subtilis subsp. subtilis str. 168	46.705	95.879	0.448