Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | EQZ20_RS14675 | Genome accession | NZ_CP035232 |
| Coordinates | 2852195..2852530 (+) | Length | 111 a.a. |
| NCBI ID | WP_096891855.1 | Uniprot ID | - |
| Organism | Bacillus glycinifermentans strain SRCM103574 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2847195..2857530
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQZ20_RS14655 (EQZ20_14655) | gcvT | 2847660..2848754 (-) | 1095 | WP_046129959.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| EQZ20_RS14660 (EQZ20_14660) | - | 2849334..2851001 (+) | 1668 | WP_046129960.1 | SNF2-related protein | - |
| EQZ20_RS14665 (EQZ20_14665) | - | 2851005..2851799 (+) | 795 | WP_046129961.1 | YqhG family protein | - |
| EQZ20_RS14670 (EQZ20_14670) | sinI | 2851985..2852161 (+) | 177 | WP_046129962.1 | anti-repressor SinI family protein | Regulator |
| EQZ20_RS14675 (EQZ20_14675) | sinR | 2852195..2852530 (+) | 336 | WP_096891855.1 | transcriptional regulator SinR | Regulator |
| EQZ20_RS14680 (EQZ20_14680) | - | 2852634..2853428 (-) | 795 | WP_046129964.1 | TasA family protein | - |
| EQZ20_RS14685 (EQZ20_14685) | - | 2853497..2854078 (-) | 582 | WP_046129965.1 | signal peptidase I | - |
| EQZ20_RS14690 (EQZ20_14690) | tapA | 2854075..2854800 (-) | 726 | WP_046129966.1 | amyloid fiber anchoring/assembly protein TapA | - |
| EQZ20_RS14695 (EQZ20_14695) | - | 2855063..2855386 (+) | 324 | WP_046129967.1 | DUF3889 domain-containing protein | - |
| EQZ20_RS14700 (EQZ20_14700) | - | 2855471..2855653 (-) | 183 | WP_046129968.1 | YqzE family protein | - |
| EQZ20_RS14705 (EQZ20_14705) | comGG | 2855735..2856100 (-) | 366 | WP_046129969.1 | competence type IV pilus minor pilin ComGG | - |
| EQZ20_RS14710 (EQZ20_14710) | comGF | 2856112..2856597 (-) | 486 | WP_082094061.1 | competence type IV pilus minor pilin ComGF | - |
| EQZ20_RS14715 (EQZ20_14715) | comGE | 2856512..2856859 (-) | 348 | WP_046129970.1 | competence type IV pilus minor pilin ComGE | - |
| EQZ20_RS14720 (EQZ20_14720) | comGD | 2856843..2857286 (-) | 444 | WP_046129971.1 | competence type IV pilus minor pilin ComGD | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12894.48 Da Isoelectric Point: 5.2973
>NTDB_id=336532 EQZ20_RS14675 WP_096891855.1 2852195..2852530(+) (sinR) [Bacillus glycinifermentans strain SRCM103574]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKDETEYDGQLDSEWEN
LVRDAMASGVSKKQFREFLDYQKWKKSQEKE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKDETEYDGQLDSEWEN
LVRDAMASGVSKKQFREFLDYQKWKKSQEKE
Nucleotide
Download Length: 336 bp
>NTDB_id=336532 EQZ20_RS14675 WP_096891855.1 2852195..2852530(+) (sinR) [Bacillus glycinifermentans strain SRCM103574]
TTGATTGGCCAGCGTATTAAACAATATCGAAAAGAAAAAGGCTACTCACTATCTGAACTAGCTGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAATTTGCAAACAAACCCCTCCATTCAATTTCTAGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACCCTGCTTGATGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAT
CTAGTTCGTGACGCGATGGCATCAGGGGTTTCTAAAAAACAATTTCGAGAATTTTTAGATTACCAAAAATGGAAGAAGAG
TCAGGAAAAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATATCGAAAAGAAAAAGGCTACTCACTATCTGAACTAGCTGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAATTTGCAAACAAACCCCTCCATTCAATTTCTAGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACCCTGCTTGATGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAT
CTAGTTCGTGACGCGATGGCATCAGGGGTTTCTAAAAAACAATTTCGAGAATTTTTAGATTACCAAAAATGGAAGAAGAG
TCAGGAAAAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |