Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   EQZ01_RS16475 Genome accession   NZ_CP035231
Coordinates   3136022..3138331 (-) Length   769 a.a.
NCBI ID   WP_128738181.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103571     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3131022..3143331
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQZ01_RS16435 (EQZ01_16435) mrpB 3131489..3131920 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  EQZ01_RS16440 (EQZ01_16440) mrpC 3131920..3132261 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  EQZ01_RS16445 (EQZ01_16445) mrpD 3132254..3133735 (+) 1482 WP_128738179.1 Na+/H+ antiporter subunit D -
  EQZ01_RS16450 (EQZ01_16450) mrpE 3133741..3134217 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  EQZ01_RS16455 (EQZ01_16455) mrpF 3134217..3134501 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  EQZ01_RS16460 (EQZ01_16460) mnhG 3134485..3134859 (+) 375 WP_128738180.1 monovalent cation/H(+) antiporter subunit G -
  EQZ01_RS16465 (EQZ01_16465) yuxO 3134898..3135278 (-) 381 WP_071579112.1 hotdog fold thioesterase -
  EQZ01_RS16470 (EQZ01_16470) comA 3135297..3135941 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  EQZ01_RS16475 (EQZ01_16475) comP 3136022..3138331 (-) 2310 WP_128738181.1 two-component system sensor histidine kinase ComP Regulator
  EQZ01_RS16480 (EQZ01_16480) comX 3138346..3138513 (-) 168 WP_100505762.1 competence pheromone ComX Regulator
  EQZ01_RS16485 (EQZ01_16485) comQ 3138497..3139399 (-) 903 WP_128738182.1 polyprenyl synthetase family protein Regulator
  EQZ01_RS16490 (EQZ01_16490) degQ 3139584..3139724 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  EQZ01_RS16495 (EQZ01_16495) - 3139946..3140071 (+) 126 WP_003228793.1 hypothetical protein -
  EQZ01_RS16500 (EQZ01_16500) - 3140185..3140553 (+) 369 WP_116315920.1 hypothetical protein -
  EQZ01_RS16505 (EQZ01_16505) pdeH 3140529..3141758 (-) 1230 WP_128738183.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 769 a.a.        Molecular weight: 89433.14 Da        Isoelectric Point: 8.7553

>NTDB_id=336480 EQZ01_RS16475 WP_128738181.1 3136022..3138331(-) (comP) [Bacillus subtilis strain SRCM103571]
MKNLIKKFTLAVIVLSILYIFYITYITMNGIIIGTKVLKNDKSQFVIEEISESSYGQFVGLRQGDIILKINEEKPSDKHL
KWGYLSHINSLDILRSGKKIHLKDFDLVTLNRPYSFFLFVLPLVFYFLSIICIFYILKVNKIRRSFAGYILILLLLDISI
AYISAGGPFRGHRINRYINLFTFISSPILYLQFIQGYLREIGKAFLNRIYFLYIIPIFNLGIEFFRAYLQVDIDFLATVN
LVSFAILTLFAFSSIYFHLNKYKYAEHSFILKLLILTNTLSFAPFLIFYVLPIIFTGNYVFPALVSASLLVLIPFGLVYQ
FVANKMFDIEFILGRMRYYALLAMIPTLFIVGALVWLDVMKIQMNPVRQTVFFFVVMFAVFYFKEVMDFKFRLKRFSEKF
NYQDSIFKYTQLMRGVTSLQQVFKELKNTILDVLLVSKAYTFEVTPDHKVIFLDKHEIGPDWHLYQEEFENVTSEIGKII
EVNQGFLMKVGERGGSSYVLLCLSNINTPRLTRDEISWLKTLSFYTSVSMENVMHIEELMEHLKDLKQEGTNPIWLKKLM
FAIEEKQRSGLARDLHDSVLQDLISLKRQCELFLGDFKKGDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYD
LGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDG
VGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=336480 EQZ01_RS16475 WP_128738181.1 3136022..3138331(-) (comP) [Bacillus subtilis strain SRCM103571]
TTGAAGAACTTAATAAAAAAATTCACATTAGCTGTAATTGTGTTGAGCATCCTCTATATATTCTATATAACTTATATAAC
AATGAATGGAATTATTATTGGAACTAAGGTTCTTAAAAATGATAAAAGTCAATTTGTGATAGAAGAAATATCAGAATCTT
CATATGGACAATTTGTTGGTTTGAGACAGGGAGATATCATATTAAAAATTAATGAAGAAAAACCTTCAGACAAACATTTG
AAATGGGGATATTTGAGTCATATTAACAGTCTGGATATTTTGAGAAGTGGAAAAAAGATTCATCTCAAAGATTTTGATTT
AGTTACGCTAAATAGACCTTATAGTTTTTTTCTGTTCGTACTTCCTTTGGTTTTTTATTTTTTAAGCATAATATGTATTT
TTTATATACTTAAGGTAAATAAAATAAGAAGATCATTTGCTGGTTATATTCTTATTCTATTGTTATTAGACATTTCTATT
GCTTATATAAGTGCAGGCGGACCATTTAGAGGACATAGAATCAATCGGTATATTAACTTGTTTACTTTTATATCTTCTCC
TATTCTTTATCTTCAATTTATCCAAGGATATCTTAGAGAAATAGGAAAAGCTTTTTTGAATAGAATCTATTTTCTTTATA
TCATACCAATATTTAATCTTGGAATTGAGTTTTTCCGAGCCTATTTACAAGTTGATATTGATTTTTTAGCGACTGTTAAC
TTGGTTTCTTTTGCGATATTGACTCTATTTGCTTTTTCGTCGATATACTTTCATCTTAATAAATATAAATATGCTGAGCA
TTCGTTTATTCTTAAATTATTAATTTTAACAAACACTCTATCATTTGCTCCATTTTTGATATTTTATGTTCTTCCAATAA
TATTTACTGGTAATTATGTTTTCCCTGCATTAGTCTCTGCATCATTACTGGTACTTATTCCGTTTGGTTTAGTGTATCAA
TTTGTAGCGAATAAAATGTTTGATATAGAGTTTATTTTAGGAAGAATGAGATATTACGCTCTACTTGCTATGATACCAAC
TCTATTTATAGTTGGAGCATTAGTTTGGTTAGATGTAATGAAAATTCAGATGAACCCTGTGCGCCAAACGGTATTTTTTT
TCGTTGTCATGTTCGCTGTCTTTTATTTTAAAGAGGTCATGGATTTTAAATTTCGGTTAAAACGTTTCTCCGAAAAATTC
AACTATCAGGACAGTATTTTTAAATATACTCAGCTAATGAGGGGTGTAACTTCTCTTCAACAAGTTTTTAAAGAACTGAA
AAATACTATACTGGATGTTTTGCTTGTAAGCAAAGCTTATACCTTTGAGGTTACTCCTGATCACAAAGTGATATTTTTAG
ATAAGCATGAAATCGGACCGGACTGGCATCTTTATCAAGAGGAGTTTGAAAATGTAACATCAGAAATCGGGAAAATTATA
GAAGTCAATCAAGGCTTTCTTATGAAAGTTGGTGAACGAGGCGGAAGTTCTTATGTTCTGCTTTGTTTATCTAATATTAA
CACTCCTCGGCTAACACGGGATGAGATATCATGGTTGAAAACACTGTCCTTCTATACAAGTGTGTCCATGGAAAATGTTA
TGCATATTGAGGAGCTCATGGAACATTTGAAGGACTTAAAACAAGAGGGAACCAACCCCATCTGGCTGAAAAAGCTAATG
TTTGCAATCGAAGAAAAACAGCGTTCAGGACTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAA
ACGCCAGTGTGAGCTGTTTTTGGGTGATTTTAAGAAGGGTGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTAC
AGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGAT
CTTGGATTGGTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGG
GAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCA
AGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGATGGC
GTAGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTT
AGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

95.449

100

0.954


Multiple sequence alignment