Detailed information NTG0336426

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: EQZ01_RS02365
• Genome accession: NZ_CP035231
• Coordinates: 456391..457539 (+)
• Length: 382 a.a.
• NCBI ID: WP_024571686.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103571
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 451391..462539

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQZ01_RS02345 (EQZ01_02345)	yclH	451766..452446 (-)	681	WP_128737507.1	ABC transporter ATP-binding protein	-
EQZ01_RS02350 (EQZ01_02350)	yclI	452462..453928 (-)	1467	WP_114523697.1	ABC transporter permease	-
EQZ01_RS02355 (EQZ01_02355)	yclJ	454137..454820 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
EQZ01_RS02360 (EQZ01_02360)	yclK	454807..456228 (+)	1422	WP_106074061.1	two-component system sensor histidine kinase YclK	-
EQZ01_RS02365 (EQZ01_02365)	rapC	456391..457539 (+)	1149	WP_024571686.1	response regulator aspartate phosphatase RapC	Regulator
EQZ01_RS02370 (EQZ01_02370)	phrC	457523..457645 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
EQZ01_RS02375 (EQZ01_02375)	yczM	457743..457832 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
EQZ01_RS02380 (EQZ01_02380)	yczN	457914..458027 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
EQZ01_RS02385 (EQZ01_02385)	thrD	458181..459545 (-)	1365	WP_106074063.1	aspartate kinase	-
EQZ01_RS02390 (EQZ01_02390)	ceuB	459930..460880 (+)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
EQZ01_RS02395 (EQZ01_02395)	yclO	460873..461820 (+)	948	WP_014475805.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45591.61 Da
• Isoelectric Point: 5.0364

>NTDB_id=336426 EQZ01_RS02365 WP_024571686.1 456391..457539(+) (rapC) [Bacillus subtilis strain SRCM103571]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLG
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=336426 EQZ01_RS02365 WP_024571686.1 456391..457539(+) (rapC) [Bacillus subtilis strain SRCM103571]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAATCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGATCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAATGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGGC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACGTTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAATACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.476	100	0.995
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568