Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   EQZ01_RS02190 Genome accession   NZ_CP035231
Coordinates   399289..399687 (-) Length   132 a.a.
NCBI ID   WP_015252845.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103571     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 394289..404687
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQZ01_RS02155 (EQZ01_02155) - 395038..395235 (+) 198 WP_128737493.1 hypothetical protein -
  EQZ01_RS02160 (EQZ01_02160) yckC 395254..395707 (+) 454 Protein_377 RDD family protein -
  EQZ01_RS02165 (EQZ01_02165) yckD 395789..396121 (+) 333 WP_128737495.1 YckD family protein -
  EQZ01_RS02170 (EQZ01_02170) - 396249..396671 (+) 423 WP_170939093.1 MarR family transcriptional regulator -
  EQZ01_RS02175 (EQZ01_02175) - 396659..397000 (+) 342 WP_032724911.1 DUF3147 family protein -
  EQZ01_RS02180 (EQZ01_02180) - 397019..397747 (+) 729 WP_128737496.1 AAA family ATPase -
  EQZ01_RS02185 (EQZ01_02185) bglC 397819..399252 (+) 1434 WP_128737497.1 6-phospho-beta-glucosidase -
  EQZ01_RS02190 (EQZ01_02190) nin/comJ 399289..399687 (-) 399 WP_015252845.1 DNA-entry nuclease inhibitor Regulator
  EQZ01_RS02195 (EQZ01_02195) nucA/comI 399714..400163 (-) 450 WP_017696127.1 DNA-entry nuclease Machinery gene
  EQZ01_RS02200 (EQZ01_02200) tlpC 400331..402052 (-) 1722 WP_128737498.1 methyl-accepting chemotaxis protein TlpC -
  EQZ01_RS02205 (EQZ01_02205) hxlB 402163..402720 (-) 558 WP_128737499.1 6-phospho-3-hexuloisomerase -
  EQZ01_RS02210 (EQZ01_02210) hxlA 402726..403358 (-) 633 WP_101169850.1 3-hexulose-6-phosphate synthase -
  EQZ01_RS02215 (EQZ01_02215) hxlR 403591..403953 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 14935.86 Da        Isoelectric Point: 4.7078

>NTDB_id=336424 EQZ01_RS02190 WP_015252845.1 399289..399687(-) (nin/comJ) [Bacillus subtilis strain SRCM103571]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVNSYETKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=336424 EQZ01_RS02190 WP_015252845.1 399289..399687(-) (nin/comJ) [Bacillus subtilis strain SRCM103571]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATACGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAACAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

98.485

100

0.985


Multiple sequence alignment