Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   EQW70_RS20150 Genome accession   NZ_CP035226
Coordinates   3830878..3830997 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain SRCM103517     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3825878..3835997
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQW70_RS20125 (EQW70_20125) albG 3826042..3826743 (+) 702 WP_128740809.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  EQW70_RS20130 (EQW70_20130) ywhL 3826749..3828125 (-) 1377 WP_128740810.1 YncE family protein -
  EQW70_RS20135 (EQW70_20135) ywhK 3828164..3829519 (-) 1356 WP_015250986.1 YncE family protein -
  EQW70_RS22540 (EQW70_20140) - 3829516..3829746 (-) 231 Protein_3903 hypothetical protein -
  EQW70_RS20145 (EQW70_20145) rapF 3829749..3830894 (+) 1146 WP_029318693.1 response regulator aspartate phosphatase RapF Regulator
  EQW70_RS20150 (EQW70_20150) phrF 3830878..3830997 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  EQW70_RS20155 (EQW70_20155) - 3831248..3831727 (+) 480 WP_015714892.1 hypothetical protein -
  EQW70_RS20160 (EQW70_20160) - 3831876..3832664 (+) 789 WP_015714893.1 membrane protein -
  EQW70_RS20165 (EQW70_20165) - 3832687..3833325 (+) 639 WP_166443877.1 hypothetical protein -
  EQW70_RS20170 (EQW70_20170) - 3833335..3834132 (+) 798 WP_223497729.1 hypothetical protein -
  EQW70_RS20175 (EQW70_20175) - 3834135..3834782 (+) 648 WP_015714896.1 ABC transporter ATP-binding protein -
  EQW70_RS20180 (EQW70_20180) - 3834775..3835335 (+) 561 WP_128740811.1 hypothetical protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=336254 EQW70_RS20150 WP_009968329.1 3830878..3830997(+) (phrF) [Bacillus subtilis strain SRCM103517]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=336254 EQW70_RS20150 WP_009968329.1 3830878..3830997(+) (phrF) [Bacillus subtilis strain SRCM103517]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment