Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   SGGBAA2069_RS02070 Genome accession   NC_015215
Coordinates   378824..379858 (+) Length   344 a.a.
NCBI ID   WP_009853438.1    Uniprot ID   A0A060RH76
Organism   Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 373824..384858
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGGBAA2069_RS02040 (SGGBAA2069_c03440) tsaE 375081..375524 (+) 444 WP_009853432.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SGGBAA2069_RS02045 (SGGBAA2069_c03450) - 375517..376029 (+) 513 WP_009853433.1 GNAT family N-acetyltransferase -
  SGGBAA2069_RS02050 (SGGBAA2069_c03460) brpA 376040..377197 (+) 1158 WP_009853434.1 biofilm formation/cell division transcriptional regulator BrpA -
  SGGBAA2069_RS02055 (SGGBAA2069_c03470) - 377315..377617 (-) 303 WP_009853435.1 hypothetical protein -
  SGGBAA2069_RS02060 (SGGBAA2069_c03480) - 377614..378033 (-) 420 WP_013642693.1 HIT family protein -
  SGGBAA2069_RS02065 (SGGBAA2069_c03490) pptA 378097..378822 (+) 726 WP_013642694.1 ABC transporter ATP-binding protein Regulator
  SGGBAA2069_RS02070 (SGGBAA2069_c03500) pptB 378824..379858 (+) 1035 WP_009853438.1 ABC transporter permease Regulator
  SGGBAA2069_RS02075 (SGGBAA2069_c03510) ccrZ 379923..380717 (+) 795 WP_012961430.1 cell cycle regulator CcrZ -
  SGGBAA2069_RS02080 (SGGBAA2069_c03520) trmB 380717..381355 (+) 639 WP_003063401.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SGGBAA2069_RS02090 (SGGBAA2069_c03530) - 381698..382723 (+) 1026 WP_012961431.1 GGDEF domain-containing protein -
  SGGBAA2069_RS02095 (SGGBAA2069_c03550) - 382729..383796 (+) 1068 Protein_348 glycosyltransferase -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 39738.84 Da        Isoelectric Point: 10.5816

>NTDB_id=33588 SGGBAA2069_RS02070 WP_009853438.1 378824..379858(+) (pptB) [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
MKEVFQKRRSAFLGQCLKYLRYVFNDHFVLVLVFLTGFLMVQYSQLLRQFPSQTVVIDVILVLVILVLLSLGKIATYLEA
PDKLFYLPKEIEILQWLSQARRRAFVIWTIVQTVILVLLAPIFFKLGFSTVTFGILLLALAVVKWLVMKEKSKVFFSQGK
FSWDAAISYEAKRRQGVLKFFSLFTTVKGISASVKRRSYLDGLLGLVKKTHAKTWSNLYLRAFLRSSDYFALTLRLLALS
LLALIFISNRLVAVGLALVFNYLLLFQLLTLSQHFDYQYLTNLYPISEKQKAANLKTFLKKLSYLLGFLELLLTFSWQAA
GLLVLVTVIITEWYLPYKINKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=33588 SGGBAA2069_RS02070 WP_009853438.1 378824..379858(+) (pptB) [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
ATGAAAGAAGTTTTTCAAAAGCGCCGTAGTGCTTTTTTAGGGCAATGCTTAAAGTATCTTCGTTATGTCTTTAATGACCA
TTTTGTGCTAGTCTTGGTTTTCTTAACAGGTTTTCTGATGGTTCAATACAGCCAGCTGTTACGTCAGTTTCCAAGTCAGA
CAGTCGTTATTGACGTGATTTTGGTCTTGGTTATCCTTGTTTTGCTTAGCCTTGGGAAGATTGCGACTTATTTGGAAGCA
CCTGATAAATTGTTCTATTTGCCAAAAGAAATTGAGATTTTGCAATGGCTATCACAGGCAAGACGTCGTGCTTTTGTGAT
TTGGACGATCGTGCAAACGGTAATTCTTGTCTTATTAGCTCCTATCTTCTTTAAACTAGGTTTTTCAACGGTTACCTTTG
GCATTTTATTGCTTGCTTTAGCGGTTGTGAAATGGCTTGTAATGAAAGAAAAAAGCAAGGTATTCTTTTCTCAAGGAAAA
TTTTCATGGGATGCTGCCATTTCTTATGAAGCAAAACGTCGTCAAGGAGTACTTAAATTCTTTTCACTTTTCACAACGGT
TAAGGGAATTTCAGCTAGTGTGAAACGTCGTTCGTACTTGGATGGTTTGCTTGGTTTGGTCAAAAAAACACATGCCAAAA
CATGGTCAAATTTGTACCTACGTGCGTTTTTACGGAGTTCAGATTATTTTGCTTTAACCTTGCGATTACTCGCATTGAGC
TTGCTTGCGCTTATCTTTATTTCCAATCGCTTGGTAGCAGTTGGCTTGGCTTTGGTCTTTAATTATTTATTACTTTTTCA
ATTATTAACCCTATCCCAACATTTTGATTATCAATATTTGACCAATCTTTATCCAATTTCTGAAAAGCAAAAGGCGGCTA
ATTTAAAGACATTTTTGAAAAAATTATCGTATTTACTGGGCTTTTTGGAGTTGTTATTAACGTTTTCTTGGCAAGCAGCG
GGCTTGTTGGTTTTGGTAACGGTTATTATTACAGAATGGTATCTTCCTTACAAAATCAATAAGATGATTGACTAG

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(159-328)

Bacterial ABC transporter protein EcsB (EcsB)

(2-159)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A060RH76

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

46.221

100

0.462
  pptB Streptococcus salivarius strain HSISS4

46.221

100

0.462

Multiple sequence alignment