Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   EQJ69_RS13205 Genome accession   NZ_CP035188
Coordinates   2537248..2538048 (-) Length   266 a.a.
NCBI ID   WP_003183361.1    Uniprot ID   -
Organism   Bacillus licheniformis strain SRCM103914     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2532248..2543048
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQJ69_RS13170 (EQJ69_13170) - 2533439..2533693 (+) 255 WP_003183348.1 DUF2627 domain-containing protein -
  EQJ69_RS13175 (EQJ69_13175) - 2533744..2534469 (-) 726 WP_075178205.1 glycerophosphodiester phosphodiesterase -
  EQJ69_RS13180 (EQJ69_13180) - 2534603..2535178 (-) 576 WP_224990934.1 N-acetylmuramoyl-L-alanine amidase -
  EQJ69_RS13185 (EQJ69_13185) - 2535259..2535579 (-) 321 WP_034291702.1 hypothetical protein -
  EQJ69_RS23760 - 2535578..2535823 (+) 246 WP_021837567.1 hypothetical protein -
  EQJ69_RS13195 (EQJ69_13195) - 2536067..2536453 (-) 387 WP_009327922.1 serine acetyltransferase -
  EQJ69_RS13200 (EQJ69_13200) - 2536579..2536875 (-) 297 WP_003183359.1 antimicrobial peptide LCI -
  EQJ69_RS13205 (EQJ69_13205) spo0A 2537248..2538048 (-) 801 WP_003183361.1 sporulation transcription factor Spo0A Regulator
  EQJ69_RS13210 (EQJ69_13210) spoIVB 2538338..2539654 (-) 1317 WP_044051837.1 SpoIVB peptidase -
  EQJ69_RS13215 (EQJ69_13215) recN 2539804..2541534 (-) 1731 WP_003183366.1 DNA repair protein RecN Machinery gene
  EQJ69_RS13220 (EQJ69_13220) argR 2541566..2542015 (-) 450 WP_003183369.1 transcriptional regulator ArgR -
  EQJ69_RS13225 (EQJ69_13225) - 2542181..2543026 (-) 846 WP_003183371.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29541.06 Da        Isoelectric Point: 6.6109

>NTDB_id=335824 EQJ69_RS13205 WP_003183361.1 2537248..2538048(-) (spo0A) [Bacillus licheniformis strain SRCM103914]
MEKIKVCVADDNRELVGLLSEYIEGQSDMEVLGVAYNGQECLSLFKDKEPDVLVLDIIMPHLDGLAVLERLRESQLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGSQLTHRAPSSQSSVLRPQPESPKKNLDASITTII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MSKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=335824 EQJ69_RS13205 WP_003183361.1 2537248..2538048(-) (spo0A) [Bacillus licheniformis strain SRCM103914]
GTGGAGAAAATTAAAGTATGTGTTGCTGATGATAACAGGGAGCTTGTCGGCCTATTAAGCGAATATATCGAGGGACAGAG
CGACATGGAAGTGCTTGGTGTCGCATACAACGGACAGGAATGCCTTTCTTTGTTTAAAGACAAGGAGCCCGACGTGCTTG
TGCTGGATATAATCATGCCTCATCTCGACGGATTGGCCGTTCTTGAAAGGCTGAGGGAATCGCAGCTTAAAAAGCAGCCG
AATGTCATCATGCTGACGGCGTTCGGCCAGGAAGACGTGACCAAAAAAGCTGTAGATTTAGGCGCGTCGTATTTTATTTT
GAAGCCTTTTGACATGGAGAATTTAGTCGGACATATCCGCCAGGTCAGCGGAAACGGATCTCAATTGACACACCGTGCCC
CGTCCTCTCAAAGCAGTGTGCTTCGGCCGCAGCCTGAATCGCCGAAGAAAAACCTGGACGCCAGCATCACGACCATCATC
CACGAAATCGGCGTACCTGCTCATATTAAAGGCTATTTGTACTTAAGAGAAGCCATCTCCATGGTATATAACGACATCGA
ACTGCTCGGCAGCATTACAAAAGTGCTTTATCCGGATATCGCCAAAAAATTCAACACGACTGCAAGCCGCGTCGAACGGG
CGATTCGCCACGCCATCGAAGTCGCATGGAGCAGAGGCAACATCGACTCGATTTCGTCACTTTTCGGCTACACAGTCAGC
ATGTCAAAAGCAAAGCCGACCAATAGTGAGTTCATCGCGATGGTCGCAGACAAGCTGAGACTGGAGCATAAGGCTTCTTA
A

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

92.135

100

0.925

Multiple sequence alignment