Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | EQ842_RS10185 | Genome accession | NZ_CP035185 |
| Coordinates | 2131116..2131496 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 11A1213CRGN055 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2126116..2136496
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQ842_RS10155 (EQ842_10155) | tadA | 2126234..2126737 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| EQ842_RS10160 (EQ842_10160) | - | 2126744..2127868 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| EQ842_RS10165 (EQ842_10165) | ung | 2127865..2128578 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| EQ842_RS10170 (EQ842_10170) | - | 2128629..2129225 (-) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| EQ842_RS10175 (EQ842_10175) | gspK | 2129456..2130415 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| EQ842_RS10180 (EQ842_10180) | xcpW | 2130415..2131116 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| EQ842_RS10185 (EQ842_10185) | xcpV | 2131116..2131496 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| EQ842_RS10190 (EQ842_10190) | - | 2131486..2132040 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| EQ842_RS10195 (EQ842_10195) | - | 2132050..2132658 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| EQ842_RS10200 (EQ842_10200) | - | 2132696..2133469 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| EQ842_RS10205 (EQ842_10205) | - | 2133487..2133828 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| EQ842_RS10210 (EQ842_10210) | - | 2133840..2134820 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| EQ842_RS10215 (EQ842_10215) | kdsB | 2134832..2135593 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=335669 EQ842_RS10185 WP_000836911.1 2131116..2131496(-) (xcpV) [Acinetobacter baumannii strain 11A1213CRGN055]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=335669 EQ842_RS10185 WP_000836911.1 2131116..2131496(-) (xcpV) [Acinetobacter baumannii strain 11A1213CRGN055]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |