Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   SEQ_RS09900 Genome accession   NC_012471
Coordinates   2030385..2031650 (-) Length   421 a.a.
NCBI ID   WP_015898575.1    Uniprot ID   -
Organism   Streptococcus equi subsp. equi 4047     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2025385..2036650
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SEQ_RS09890 (SEQ_2004) - 2027650..2028207 (-) 558 WP_015898573.1 nucleotidyltransferase family protein -
  SEQ_RS09895 (SEQ_2005) - 2028259..2030115 (-) 1857 WP_015898574.1 proline--tRNA ligase -
  SEQ_RS09900 (SEQ_2006) eeP 2030385..2031650 (-) 1266 WP_015898575.1 RIP metalloprotease RseP Regulator
  SEQ_RS09905 (SEQ_2007) - 2031682..2032476 (-) 795 WP_015898576.1 phosphatidate cytidylyltransferase -
  SEQ_RS09910 (SEQ_2008) - 2032486..2033235 (-) 750 WP_012677325.1 isoprenyl transferase -
  SEQ_RS09915 (SEQ_2009) yajC 2033409..2033768 (-) 360 WP_015898577.1 preprotein translocase subunit YajC -
  SEQ_RS09920 (SEQ_2010) - 2033882..2034184 (-) 303 WP_074632271.1 thioredoxin domain-containing protein -
  SEQ_RS09925 (SEQ_2011) - 2034353..2035972 (-) 1620 WP_015898578.1 alpha-glucosidase -

Sequence


Protein


Download         Length: 421 a.a.        Molecular weight: 45998.51 Da        Isoelectric Point: 5.9240

>NTDB_id=33550 SEQ_RS09900 WP_015898575.1 2030385..2031650(-) (eeP) [Streptococcus equi subsp. equi 4047]
MLGIITFIIIFGILVLVHEFGHFYFAKRSGILVREFAIGMGPKLFSHVDQQGTLYTIRLLPLGGYVRMAGWGDDTTEIKT
GTPASLTLNDQGLVKRINLSQSKLDPTSLPMNVTAYDLEDKLTITGLVLDEIKTYSVDHDATIVEEDGTEIRIAPLDVQY
QNASIGGRLITNFAGPMNNFILGIVVFILFAFVQGGVADYHSNHIRVVENGAAAKAGIRDNDQILEINHQKINDWYELTQ
AVTDSAADVKAKGKLEITYQTGDQVKTIALKPEKKGDQYLIGVQYPLKTSLTDKLIGGFEMAGNGALVIVTALKSLITSF
SLDKLGGPVAMYQMSNQAAKNGLESVLSLMAMLSINLGIFNLIPIPALDGGKILMNVIEALRRKPLKQETETYITLAGVA
IMVVLMIAVTWNDIMRAFFQG

Nucleotide


Download         Length: 1266 bp        

>NTDB_id=33550 SEQ_RS09900 WP_015898575.1 2030385..2031650(-) (eeP) [Streptococcus equi subsp. equi 4047]
ATGTTAGGAATAATTACCTTTATTATTATTTTTGGTATTCTTGTGCTTGTCCATGAGTTTGGCCATTTCTATTTTGCTAA
ACGATCTGGTATTTTAGTCAGAGAGTTTGCTATTGGCATGGGACCAAAACTCTTTTCGCATGTTGATCAGCAAGGAACGC
TTTACACGATCCGGCTATTACCGCTTGGTGGCTATGTGCGAATGGCAGGCTGGGGTGATGACACAACTGAGATAAAAACA
GGAACGCCTGCTAGCTTAACGCTTAATGATCAGGGCTTGGTCAAGCGGATTAACCTGTCTCAGAGCAAGCTTGATCCGAC
TAGCCTGCCTATGAATGTGACTGCTTATGACTTAGAAGATAAGTTGACGATTACAGGGCTGGTTCTTGATGAGATCAAGA
CCTATTCGGTAGACCATGACGCGACCATTGTCGAGGAGGACGGTACAGAGATCCGGATTGCGCCGCTTGATGTTCAGTAT
CAAAACGCAAGCATTGGCGGTCGTTTGATCACCAATTTTGCAGGACCTATGAATAATTTTATTCTAGGTATTGTTGTCTT
TATTTTGTTTGCCTTTGTTCAAGGTGGTGTGGCTGATTATCATAGCAACCATATTCGTGTGGTGGAAAATGGCGCAGCAG
CCAAGGCTGGTATTAGAGACAATGATCAGATTTTAGAGATTAATCATCAAAAGATTAATGACTGGTATGAGTTGACGCAG
GCCGTTACTGATTCAGCAGCAGATGTTAAGGCTAAGGGCAAGCTAGAGATTACCTATCAGACAGGTGATCAGGTTAAGAC
TATAGCACTGAAGCCTGAAAAAAAAGGCGATCAGTACCTTATTGGTGTCCAGTACCCACTAAAAACAAGTCTGACAGACA
AGCTAATAGGTGGCTTTGAGATGGCTGGTAATGGTGCTCTAGTGATTGTCACTGCTCTAAAGAGTTTGATTACCTCCTTT
AGCCTAGATAAATTAGGTGGGCCAGTTGCCATGTATCAGATGTCCAATCAGGCAGCAAAGAATGGTTTAGAGTCTGTCTT
GTCCTTGATGGCAATGCTCTCTATCAATTTAGGGATTTTTAATTTGATTCCGATTCCCGCACTAGATGGTGGTAAGATCC
TGATGAATGTGATTGAAGCACTTCGTCGTAAGCCATTAAAGCAAGAGACAGAGACTTATATTACCCTTGCAGGTGTTGCG
ATTATGGTGGTACTCATGATTGCAGTGACCTGGAACGATATTATGCGAGCCTTTTTCCAAGGCTGA

Domains


Predicted by InterproScan.

(6-405)

(206-237)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

68.095

99.762

0.679

  eeP Streptococcus thermophilus LMD-9

67.857

99.762

0.677


Multiple sequence alignment