Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   EQJ08_RS19160 Genome accession   NZ_CP035167
Coordinates   3708950..3709069 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain SRCM104008     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3703950..3714069
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQJ08_RS19135 (EQJ08_19135) albG 3704114..3704815 (+) 702 WP_041850410.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  EQJ08_RS19140 (EQJ08_19140) ywhL 3704821..3706197 (-) 1377 WP_128441926.1 YncE family protein -
  EQJ08_RS19145 (EQJ08_19145) ywhK 3706236..3707591 (-) 1356 WP_015250986.1 YncE family protein -
  EQJ08_RS21365 (EQJ08_19150) - 3707588..3707818 (-) 231 WP_069703618.1 hypothetical protein -
  EQJ08_RS19155 (EQJ08_19155) rapF 3707821..3708966 (+) 1146 WP_029318693.1 response regulator aspartate phosphatase RapF Regulator
  EQJ08_RS19160 (EQJ08_19160) phrF 3708950..3709069 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  EQJ08_RS21265 - 3709139..3709303 (-) 165 WP_248719425.1 hypothetical protein -
  EQJ08_RS19165 (EQJ08_19165) - 3709224..3709633 (+) 410 Protein_3706 YbaK/EbsC family protein -
  EQJ08_RS19170 (EQJ08_19170) speB 3709664..3710536 (-) 873 WP_003227545.1 agmatinase -
  EQJ08_RS19175 (EQJ08_19175) speE 3710597..3711427 (-) 831 WP_003227543.1 spermidine synthase -
  EQJ08_RS19180 (EQJ08_19180) pbpG 3711630..3713705 (+) 2076 WP_038427996.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=335475 EQJ08_RS19160 WP_009968329.1 3708950..3709069(+) (phrF) [Bacillus subtilis strain SRCM104008]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=335475 EQJ08_RS19160 WP_009968329.1 3708950..3709069(+) (phrF) [Bacillus subtilis strain SRCM104008]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment