Detailed information NTG0335474

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: EQJ08_RS19155
• Genome accession: NZ_CP035167
• Coordinates: 3707821..3708966 (+)
• Length: 381 a.a.
• NCBI ID: WP_029318693.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM104008
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3702821..3713966

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQJ08_RS19130 (EQJ08_19130)	albF	3702837..3704117 (+)	1281	WP_041850411.1	pitrilysin family protein	-
EQJ08_RS19135 (EQJ08_19135)	albG	3704114..3704815 (+)	702	WP_041850410.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
EQJ08_RS19140 (EQJ08_19140)	ywhL	3704821..3706197 (-)	1377	WP_128441926.1	YncE family protein	-
EQJ08_RS19145 (EQJ08_19145)	ywhK	3706236..3707591 (-)	1356	WP_015250986.1	YncE family protein	-
EQJ08_RS21365 (EQJ08_19150)	-	3707588..3707818 (-)	231	WP_069703618.1	hypothetical protein	-
EQJ08_RS19155 (EQJ08_19155)	rapF	3707821..3708966 (+)	1146	WP_029318693.1	response regulator aspartate phosphatase RapF	Regulator
EQJ08_RS19160 (EQJ08_19160)	phrF	3708950..3709069 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
EQJ08_RS21265	-	3709139..3709303 (-)	165	WP_248719425.1	hypothetical protein	-
EQJ08_RS19165 (EQJ08_19165)	-	3709224..3709633 (+)	410	Protein_3706	YbaK/EbsC family protein	-
EQJ08_RS19170 (EQJ08_19170)	speB	3709664..3710536 (-)	873	WP_003227545.1	agmatinase	-
EQJ08_RS19175 (EQJ08_19175)	speE	3710597..3711427 (-)	831	WP_003227543.1	spermidine synthase	-
EQJ08_RS19180 (EQJ08_19180)	pbpG	3711630..3713705 (+)	2076	WP_038427996.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45594.05 Da
• Isoelectric Point: 5.0624

>NTDB_id=335474 EQJ08_RS19155 WP_029318693.1 3707821..3708966(+) (rapF) [Bacillus subtilis strain SRCM104008]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=335474 EQJ08_RS19155 WP_029318693.1 3707821..3708966(+) (rapF) [Bacillus subtilis strain SRCM104008]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACATATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572