Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | EQJ08_RS12255 | Genome accession | NZ_CP035167 |
| Coordinates | 2396861..2397898 (-) | Length | 345 a.a. |
| NCBI ID | WP_077671432.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM104008 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2391861..2402898
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQJ08_RS12205 (EQJ08_12205) | tasA | 2391957..2392742 (-) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| EQJ08_RS12210 (EQJ08_12210) | sipW | 2392807..2393379 (-) | 573 | WP_077671469.1 | signal peptidase I SipW | - |
| EQJ08_RS12215 (EQJ08_12215) | tapA | 2393363..2394124 (-) | 762 | WP_032726156.1 | amyloid fiber anchoring/assembly protein TapA | - |
| EQJ08_RS12220 (EQJ08_12220) | yqzG | 2394396..2394722 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| EQJ08_RS12225 (EQJ08_12225) | spoIITA | 2394764..2394943 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| EQJ08_RS12230 (EQJ08_12230) | comGG | 2395015..2395389 (-) | 375 | WP_032726157.1 | ComG operon protein ComGG | Machinery gene |
| EQJ08_RS12235 (EQJ08_12235) | comGF | 2395390..2395773 (-) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| EQJ08_RS12240 (EQJ08_12240) | comGE | 2395799..2396146 (-) | 348 | WP_021480020.1 | ComG operon protein 5 | Machinery gene |
| EQJ08_RS12245 (EQJ08_12245) | comGD | 2396130..2396561 (-) | 432 | WP_038829732.1 | comG operon protein ComGD | Machinery gene |
| EQJ08_RS12250 (EQJ08_12250) | comGC | 2396551..2396847 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| EQJ08_RS12255 (EQJ08_12255) | comGB | 2396861..2397898 (-) | 1038 | WP_077671432.1 | comG operon protein ComGB | Machinery gene |
| EQJ08_RS12260 (EQJ08_12260) | comGA | 2397885..2398955 (-) | 1071 | WP_070547533.1 | competence protein ComGA | Machinery gene |
| EQJ08_RS12265 (EQJ08_12265) | - | 2399183..2399365 (-) | 183 | WP_033884706.1 | hypothetical protein | - |
| EQJ08_RS12270 (EQJ08_12270) | corA | 2399367..2400320 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| EQJ08_RS12275 (EQJ08_12275) | yqhB | 2400463..2401791 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
| EQJ08_RS12280 (EQJ08_12280) | rsbRD | 2401844..2402680 (-) | 837 | WP_021480027.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39665.05 Da Isoelectric Point: 9.5258
>NTDB_id=335447 EQJ08_RS12255 WP_077671432.1 2396861..2397898(-) (comGB) [Bacillus subtilis strain SRCM104008]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLSYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLSYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=335447 EQJ08_RS12255 WP_077671432.1 2396861..2397898(-) (comGB) [Bacillus subtilis strain SRCM104008]
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGAGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGAGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.071 |
93.623 |
0.928 |