Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   EQI87_RS02185 Genome accession   NZ_CP035166
Coordinates   424783..425733 (+) Length   316 a.a.
NCBI ID   WP_038428356.1    Uniprot ID   A0AA96ZV99
Organism   Bacillus subtilis strain SRCM103971     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 419783..430733
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQI87_RS02160 (EQI87_02160) rapC 421242..422390 (+) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator
  EQI87_RS02165 (EQI87_02165) phrC 422374..422496 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  EQI87_RS02170 (EQI87_02170) yczM 422596..422685 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  EQI87_RS02175 (EQI87_02175) yczN 422767..422880 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  EQI87_RS02180 (EQI87_02180) thrD 423034..424398 (-) 1365 WP_038428355.1 aspartate kinase -
  EQI87_RS02185 (EQI87_02185) ceuB 424783..425733 (+) 951 WP_038428356.1 petrobactin ABC transporter permease YclN Machinery gene
  EQI87_RS02190 (EQI87_02190) yclO 425726..426673 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  EQI87_RS02195 (EQI87_02195) yclP 426667..427425 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  EQI87_RS02200 (EQI87_02200) yclQ 427447..428400 (+) 954 WP_038428358.1 petrobactin ABC transporter substrate-binding protein YclQ -
  EQI87_RS02205 (EQI87_02205) cdaE 428447..429865 (-) 1419 WP_014478836.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34885.30 Da        Isoelectric Point: 9.9364

>NTDB_id=335328 EQI87_RS02185 WP_038428356.1 424783..425733(+) (ceuB) [Bacillus subtilis strain SRCM103971]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYLYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=335328 EQI87_RS02185 WP_038428356.1 424783..425733(+) (ceuB) [Bacillus subtilis strain SRCM103971]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTGATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATTTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCAGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment