Detailed information NTG0335326

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: EQI87_RS02160
• Genome accession: NZ_CP035166
• Coordinates: 421242..422390 (+)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis strain SRCM103971
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 416242..427390

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQI87_RS02140 (EQI87_02140)	yclH	416618..417298 (-)	681	WP_038428353.1	ABC transporter ATP-binding protein	-
EQI87_RS02145 (EQI87_02145)	yclI	417314..418774 (-)	1461	WP_038428354.1	ABC transporter permease	-
EQI87_RS02150 (EQI87_02150)	yclJ	418987..419670 (+)	684	WP_015482792.1	two-component system response regulator YclJ	-
EQI87_RS02155 (EQI87_02155)	yclK	419657..421078 (+)	1422	WP_082098066.1	two-component system sensor histidine kinase YclK	-
EQI87_RS02160 (EQI87_02160)	rapC	421242..422390 (+)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
EQI87_RS02165 (EQI87_02165)	phrC	422374..422496 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
EQI87_RS02170 (EQI87_02170)	yczM	422596..422685 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
EQI87_RS02175 (EQI87_02175)	yczN	422767..422880 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
EQI87_RS02180 (EQI87_02180)	thrD	423034..424398 (-)	1365	WP_038428355.1	aspartate kinase	-
EQI87_RS02185 (EQI87_02185)	ceuB	424783..425733 (+)	951	WP_038428356.1	petrobactin ABC transporter permease YclN	Machinery gene
EQI87_RS02190 (EQI87_02190)	yclO	425726..426673 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=335326 EQI87_RS02160 WP_003246686.1 421242..422390(+) (rapC) [Bacillus subtilis strain SRCM103971]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=335326 EQI87_RS02160 WP_003246686.1 421242..422390(+) (rapC) [Bacillus subtilis strain SRCM103971]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAATCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTAGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCCTTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTAAGAATCATTCAATGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571