Detailed information NTG0335166

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: EQI48_RS02170
• Genome accession: NZ_CP035164
• Coordinates: 427061..428209 (+)
• Length: 382 a.a.
• NCBI ID: WP_024571686.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM104005
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 422061..433209

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQI48_RS02150 (EQI48_02150)	yclH	422432..423112 (-)	681	WP_128471715.1	ABC transporter ATP-binding protein	-
EQI48_RS02155 (EQI48_02155)	yclI	423128..424594 (-)	1467	WP_095010768.1	ABC transporter permease	-
EQI48_RS02160 (EQI48_02160)	yclJ	424807..425490 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
EQI48_RS02165 (EQI48_02165)	yclK	425477..426898 (+)	1422	WP_088325304.1	two-component system sensor histidine kinase YclK	-
EQI48_RS02170 (EQI48_02170)	rapC	427061..428209 (+)	1149	WP_024571686.1	response regulator aspartate phosphatase RapC	Regulator
EQI48_RS02175 (EQI48_02175)	phrC	428193..428315 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
EQI48_RS02180 (EQI48_02180)	yczM	428415..428504 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
EQI48_RS02185 (EQI48_02185)	yczN	428586..428699 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
EQI48_RS02190 (EQI48_02190)	thrD	428853..430217 (-)	1365	WP_033883679.1	aspartate kinase	-
EQI48_RS02195 (EQI48_02195)	ceuB	430602..431552 (+)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
EQI48_RS02200 (EQI48_02200)	yclO	431545..432492 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45591.61 Da
• Isoelectric Point: 5.0364

>NTDB_id=335166 EQI48_RS02170 WP_024571686.1 427061..428209(+) (rapC) [Bacillus subtilis strain SRCM104005]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLG
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=335166 EQI48_RS02170 WP_024571686.1 427061..428209(+) (rapC) [Bacillus subtilis strain SRCM104005]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAATCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGGC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACGTTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAATACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.476	100	0.995
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568