Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | EQI27_RS12540 | Genome accession | NZ_CP035163 |
| Coordinates | 2431772..2432809 (-) | Length | 345 a.a. |
| NCBI ID | WP_041850016.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM103923 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2426772..2437809
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQI27_RS12490 (EQI27_12490) | tasA | 2426870..2427655 (-) | 786 | WP_015251717.1 | biofilm matrix protein TasA | - |
| EQI27_RS12495 (EQI27_12495) | sipW | 2427719..2428291 (-) | 573 | WP_128492866.1 | signal peptidase I SipW | - |
| EQI27_RS12500 (EQI27_12500) | tapA | 2428275..2429036 (-) | 762 | WP_015251716.1 | amyloid fiber anchoring/assembly protein TapA | - |
| EQI27_RS12505 (EQI27_12505) | yqzG | 2429308..2429634 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| EQI27_RS12510 (EQI27_12510) | spoIITA | 2429676..2429855 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| EQI27_RS12515 (EQI27_12515) | comGG | 2429926..2430300 (-) | 375 | WP_015251714.1 | ComG operon protein ComGG | Machinery gene |
| EQI27_RS12520 (EQI27_12520) | comGF | 2430301..2430684 (-) | 384 | WP_041850015.1 | ComG operon protein ComGF | Machinery gene |
| EQI27_RS12525 (EQI27_12525) | comGE | 2430710..2431057 (-) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| EQI27_RS12530 (EQI27_12530) | comGD | 2431041..2431472 (-) | 432 | WP_004398628.1 | comG operon protein ComGD | Machinery gene |
| EQI27_RS12535 (EQI27_12535) | comGC | 2431462..2431758 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| EQI27_RS12540 (EQI27_12540) | comGB | 2431772..2432809 (-) | 1038 | WP_041850016.1 | comG operon protein ComGB | Machinery gene |
| EQI27_RS12545 (EQI27_12545) | comGA | 2432796..2433866 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| EQI27_RS12555 (EQI27_12555) | corA | 2434277..2435230 (-) | 954 | WP_029317911.1 | magnesium transporter CorA | - |
| EQI27_RS12560 (EQI27_12560) | yqhB | 2435373..2436701 (+) | 1329 | WP_041850018.1 | hemolysin family protein | - |
| EQI27_RS12565 (EQI27_12565) | rsbRD | 2436754..2437590 (-) | 837 | WP_041850019.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39728.18 Da Isoelectric Point: 9.6257
>NTDB_id=335126 EQI27_RS12540 WP_041850016.1 2431772..2432809(-) (comGB) [Bacillus subtilis strain SRCM103923]
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAALILLVYLSMLVPMYQMMNQM
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAALILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=335126 EQI27_RS12540 WP_041850016.1 2431772..2432809(-) (comGB) [Bacillus subtilis strain SRCM103923]
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATTCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGCTGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATTCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGCTGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.381 |
93.623 |
0.93 |