Detailed information NTG0033506

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: SEQ_RS01810
• Genome accession: NC_012471
• Coordinates: 337184..338230 (+)
• Length: 348 a.a.
• NCBI ID: WP_012678998.1
• Uniprot ID: C0M9I9
• Organism: Streptococcus equi subsp. equi 4047
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 332184..343230

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SEQ_RS01795 (SEQ_0352)	-	333390..335048 (+)	1659	WP_012678995.1	peptide ABC transporter substrate-binding protein	-
SEQ_RS01800 (SEQ_0353)	-	335217..336131 (+)	915	WP_012678996.1	ABC transporter permease	-
SEQ_RS01805 (SEQ_0354)	-	336141..337172 (+)	1032	WP_012678997.1	ABC transporter permease	-
SEQ_RS01810 (SEQ_0355)	oppD	337184..338230 (+)	1047	WP_012678998.1	ABC transporter ATP-binding protein	Regulator
SEQ_RS01815 (SEQ_0356)	amiF	338230..339165 (+)	936	WP_012678999.1	ATP-binding cassette domain-containing protein	Regulator
SEQ_RS01820 (SEQ_0357)	rnjA	339794..341476 (-)	1683	WP_012514941.1	ribonuclease J1	-
SEQ_RS01825 (SEQ_0358)	-	341478..341708 (-)	231	WP_012514942.1	DNA-dependent RNA polymerase subunit epsilon	-
SEQ_RS01830 (SEQ_0359)	tsaB	341994..342692 (+)	699	WP_012679000.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
SEQ_RS01835 (SEQ_0360)	rimI	342695..343120 (+)	426	WP_012679001.1	ribosomal protein S18-alanine N-acetyltransferase	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38587.51 Da
• Isoelectric Point: 6.6666

>NTDB_id=33506 SEQ_RS01810 WP_012678998.1 337184..338230(+) (oppD) [Streptococcus equi subsp. equi 4047]
MTNETILSVKNLHVDFKTYAGDVKAIRDISFELKKGETLAIVGESGSGKSVTTRTLMGLNAKNASISGNICFKGKQLNEL
KEEEWVKVRGNEIAMIFQDPMTSLDPTMTIGMQIAEAIMIHQSIHKTEALKRALDLMRQVGIPNAEEHLKDYPHQWSGGM
RQRAVIAIALAANPDILIADEPTTALDVTIQAQILKLMKDIQSQTASSIIFITHDLGVVAGMVDRVAVMYAGKIVEYGTV
DEVFYHPQHPYTWGLLNSMPTTATAAGSLRSIPGTPPDLLNPPKGDAFAARNEFALDIDHIKEPPMFKVSDSHYAATWLL
DERAPKITPPFPIRKRWAKWQEMEERKA

Nucleotide

• Length: 1047 bp

>NTDB_id=33506 SEQ_RS01810 WP_012678998.1 337184..338230(+) (oppD) [Streptococcus equi subsp. equi 4047]
ATGACGAATGAAACCATTTTAAGTGTCAAAAACCTCCATGTTGATTTTAAAACCTACGCTGGAGATGTTAAGGCGATTCG
TGATATCAGCTTTGAGCTAAAAAAGGGAGAGACTCTTGCGATTGTGGGAGAATCAGGCTCAGGGAAATCTGTAACCACTC
GCACGCTGATGGGGTTAAATGCTAAGAATGCAAGTATTTCAGGGAATATTTGCTTTAAGGGCAAGCAGCTCAATGAGCTG
AAGGAGGAGGAATGGGTCAAGGTGCGTGGCAATGAAATTGCAATGATCTTCCAGGATCCGATGACCAGCCTTGATCCTAC
CATGACAATTGGCATGCAGATTGCAGAGGCAATAATGATTCATCAAAGCATTCATAAGACAGAAGCCTTGAAGCGTGCTT
TAGACCTGATGCGTCAGGTTGGTATCCCAAATGCTGAGGAGCACCTTAAGGATTACCCACATCAGTGGTCTGGGGGCATG
CGGCAACGGGCTGTTATTGCCATTGCTCTAGCTGCCAATCCTGATATTTTGATTGCAGATGAGCCGACAACAGCTCTTGA
TGTTACCATTCAGGCCCAGATTTTGAAGCTGATGAAGGATATTCAGTCTCAGACCGCATCATCGATTATCTTTATTACGC
ATGACCTTGGTGTTGTTGCTGGAATGGTAGATCGCGTTGCTGTCATGTATGCTGGAAAGATTGTCGAATATGGAACGGTT
GACGAGGTATTTTATCATCCGCAGCACCCTTATACCTGGGGCTTGCTCAATTCGATGCCAACAACAGCTACTGCAGCAGG
TAGCTTGAGGTCTATTCCCGGAACGCCGCCAGATTTATTAAACCCTCCAAAGGGAGATGCTTTTGCTGCCCGTAATGAGT
TTGCCCTAGACATTGACCATATCAAAGAGCCTCCAATGTTCAAGGTAAGTGACAGCCACTACGCAGCAACCTGGTTGCTA
GATGAGCGTGCTCCTAAAATAACCCCTCCATTCCCAATCCGCAAGCGTTGGGCAAAATGGCAGGAAATGGAAGAGAGGAA
GGCTTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

3D structure

• AlphaFold DB: C0M9I9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	79.251	99.713	0.79
amiE	Streptococcus salivarius strain HSISS4	56.024	95.402	0.534
amiE	Streptococcus thermophilus LMG 18311	56.024	95.402	0.534
amiE	Streptococcus thermophilus LMD-9	56.024	95.402	0.534