Detailed information NTG0334994

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: EQH88_RS19735
• Genome accession: NZ_CP035161
• Coordinates: 3769738..3770883 (+)
• Length: 381 a.a.
• NCBI ID: WP_029318693.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103862
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3764738..3775883

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH88_RS19710 (EQH88_19710)	albF	3764754..3766034 (+)	1281	WP_128480842.1	pitrilysin family protein	-
EQH88_RS19715 (EQH88_19715)	albG	3766031..3766732 (+)	702	WP_069703620.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
EQH88_RS19720 (EQH88_19720)	ywhL	3766738..3768114 (-)	1377	WP_069703619.1	YncE family protein	-
EQH88_RS19725 (EQH88_19725)	ywhK	3768153..3769508 (-)	1356	WP_015250986.1	YncE family protein	-
EQH88_RS22035 (EQH88_19730)	-	3769505..3769735 (-)	231	WP_069703618.1	hypothetical protein	-
EQH88_RS19735 (EQH88_19735)	rapF	3769738..3770883 (+)	1146	WP_029318693.1	response regulator aspartate phosphatase RapF	Regulator
EQH88_RS19740 (EQH88_19740)	phrF	3770867..3770986 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
EQH88_RS21935	-	3771056..3771220 (-)	165	WP_248719425.1	hypothetical protein	-
EQH88_RS19745 (EQH88_19745)	-	3771141..3771550 (+)	410	Protein_3821	YbaK/EbsC family protein	-
EQH88_RS19750 (EQH88_19750)	speB	3771581..3772453 (-)	873	WP_003227545.1	agmatinase	-
EQH88_RS19755 (EQH88_19755)	speE	3772514..3773344 (-)	831	WP_003227543.1	spermidine synthase	-
EQH88_RS19760 (EQH88_19760)	pbpG	3773547..3775622 (+)	2076	WP_038427996.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45594.05 Da
• Isoelectric Point: 5.0624

>NTDB_id=334994 EQH88_RS19735 WP_029318693.1 3769738..3770883(+) (rapF) [Bacillus subtilis strain SRCM103862]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=334994 EQH88_RS19735 WP_029318693.1 3769738..3770883(+) (rapF) [Bacillus subtilis strain SRCM103862]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACATATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572