Detailed information
Bioinformatically predicted
Overview
| Name | comS | Type | Regulator |
| Locus tag | SZO_RS10925 | Genome accession | NC_012470 |
| Coordinates | 50233..50331 (+) | Length | 32 a.a. |
| NCBI ID | WP_021320241.1 | Uniprot ID | - |
| Organism | Streptococcus equi subsp. zooepidemicus | ||
| Function | activate transcription of comX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 45233..55331
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SZO_RS00265 (SZO_00330) | purE | 45261..45749 (+) | 489 | WP_012677200.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
| SZO_RS00270 (SZO_00340) | purK | 45736..46809 (+) | 1074 | WP_012677201.1 | 5-(carboxyamino)imidazole ribonucleotide synthase | - |
| SZO_RS00275 (SZO_00350) | - | 46824..47048 (+) | 225 | WP_012677202.1 | hypothetical protein | - |
| SZO_RS00280 (SZO_00380) | purB | 47645..48937 (+) | 1293 | WP_041790267.1 | adenylosuccinate lyase | - |
| SZO_RS00285 (SZO_00390) | comR | 49236..50150 (+) | 915 | WP_012677204.1 | helix-turn-helix domain-containing protein | Regulator |
| SZO_RS10925 | comS | 50233..50331 (+) | 99 | WP_021320241.1 | quorum-sensing system DWW-type pheromone | Regulator |
| SZO_RS00290 (SZO_00400) | ruvB | 50365..51372 (+) | 1008 | WP_012677205.1 | Holliday junction branch migration DNA helicase RuvB | - |
| SZO_RS00295 (SZO_00410) | - | 51613..52071 (+) | 459 | WP_012677206.1 | low molecular weight protein-tyrosine-phosphatase | - |
| SZO_RS00300 (SZO_00420) | - | 52077..52478 (+) | 402 | WP_012514718.1 | MORN repeat-containing protein | - |
| SZO_RS00305 (SZO_00430) | - | 52475..54256 (+) | 1782 | WP_012677207.1 | acyltransferase family protein | - |
Sequence
Protein
Download Length: 32 a.a. Molecular weight: 3937.66 Da Isoelectric Point: 8.5430
>NTDB_id=33494 SZO_RS10925 WP_021320241.1 50233..50331(+) (comS) [Streptococcus equi subsp. zooepidemicus]
MFKKYQYYLFLAALFLLHSAQLLSDIDWWRVG
MFKKYQYYLFLAALFLLHSAQLLSDIDWWRVG
Nucleotide
Download Length: 99 bp
>NTDB_id=33494 SZO_RS10925 WP_021320241.1 50233..50331(+) (comS) [Streptococcus equi subsp. zooepidemicus]
ATGTTTAAAAAATACCAATACTATCTGTTTTTAGCTGCTTTATTTCTACTTCATTCTGCCCAATTACTTAGTGATATTGA
CTGGTGGCGTGTTGGTTAA
ATGTTTAAAAAATACCAATACTATCTGTTTTTAGCTGCTTTATTTCTACTTCATTCTGCCCAATTACTTAGTGATATTGA
CTGGTGGCGTGTTGGTTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comS | Streptococcus pyogenes MGAS8232 |
51.613 |
96.875 |
0.5 |
| comS | Streptococcus pyogenes MGAS315 |
37.5 |
100 |
0.375 |